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Data-based Decision Rules to Personalize Depression Follow-up

Depression is a common mental illness with complex and heterogeneous progression dynamics. Risk grouping of depression treatment population based on their longitudinal patterns has the potential to enable cost-effective monitoring policy design. This paper establishes a rule-based method to identify...

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Autores principales: Lin, Ying, Huang, Shuai, Simon, Gregory E., Liu, Shan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5864956/
https://www.ncbi.nlm.nih.gov/pubmed/29567970
http://dx.doi.org/10.1038/s41598-018-23326-1
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author Lin, Ying
Huang, Shuai
Simon, Gregory E.
Liu, Shan
author_facet Lin, Ying
Huang, Shuai
Simon, Gregory E.
Liu, Shan
author_sort Lin, Ying
collection PubMed
description Depression is a common mental illness with complex and heterogeneous progression dynamics. Risk grouping of depression treatment population based on their longitudinal patterns has the potential to enable cost-effective monitoring policy design. This paper establishes a rule-based method to identify a set of risk predictive patterns from person-level longitudinal disease measurements by integrating the data transformation, rule discovery and rule evaluation. We further extend the identified rules to create rule-based monitoring strategies to adaptively monitor individuals with different disease severities. We applied the rule-based method on an electronic health record (EHR) dataset of depression treatment population containing person-level longitudinal Patient Health Questionnaire (PHQ)-9 scores for assessing depression severity. 12 risk predictive rules are identified, and the rule-based prognostic model based on identified rules enables more accurate prediction of disease severity than other prognostic models including RuleFit, logistic regression and Support Vector Machine. Two rule-based monitoring strategies outperform the latest PHQ-9 based monitoring strategy by providing higher sensitivity and specificity. The rule-based method can lead to a better understanding of disease dynamics, achieving more accurate prognostics of disease progressions, personalizing follow-up intervals, and designing cost-effective monitoring of patients in clinical practice.
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spelling pubmed-58649562018-03-27 Data-based Decision Rules to Personalize Depression Follow-up Lin, Ying Huang, Shuai Simon, Gregory E. Liu, Shan Sci Rep Article Depression is a common mental illness with complex and heterogeneous progression dynamics. Risk grouping of depression treatment population based on their longitudinal patterns has the potential to enable cost-effective monitoring policy design. This paper establishes a rule-based method to identify a set of risk predictive patterns from person-level longitudinal disease measurements by integrating the data transformation, rule discovery and rule evaluation. We further extend the identified rules to create rule-based monitoring strategies to adaptively monitor individuals with different disease severities. We applied the rule-based method on an electronic health record (EHR) dataset of depression treatment population containing person-level longitudinal Patient Health Questionnaire (PHQ)-9 scores for assessing depression severity. 12 risk predictive rules are identified, and the rule-based prognostic model based on identified rules enables more accurate prediction of disease severity than other prognostic models including RuleFit, logistic regression and Support Vector Machine. Two rule-based monitoring strategies outperform the latest PHQ-9 based monitoring strategy by providing higher sensitivity and specificity. The rule-based method can lead to a better understanding of disease dynamics, achieving more accurate prognostics of disease progressions, personalizing follow-up intervals, and designing cost-effective monitoring of patients in clinical practice. Nature Publishing Group UK 2018-03-22 /pmc/articles/PMC5864956/ /pubmed/29567970 http://dx.doi.org/10.1038/s41598-018-23326-1 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Lin, Ying
Huang, Shuai
Simon, Gregory E.
Liu, Shan
Data-based Decision Rules to Personalize Depression Follow-up
title Data-based Decision Rules to Personalize Depression Follow-up
title_full Data-based Decision Rules to Personalize Depression Follow-up
title_fullStr Data-based Decision Rules to Personalize Depression Follow-up
title_full_unstemmed Data-based Decision Rules to Personalize Depression Follow-up
title_short Data-based Decision Rules to Personalize Depression Follow-up
title_sort data-based decision rules to personalize depression follow-up
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5864956/
https://www.ncbi.nlm.nih.gov/pubmed/29567970
http://dx.doi.org/10.1038/s41598-018-23326-1
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