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Association of NRG1 and AUTS2 genetic polymorphisms with Hirschsprung disease in a South Chinese population
Hirschsprung disease (HSCR) is a genetic disorder characterized by the absence of enteric ganglia. There are more than 15 genes identified as contributed to HSCR by family‐based or population‐based approaches. However, these findings were not fulfilled to explain the heritability of most sporadic ca...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5867083/ https://www.ncbi.nlm.nih.gov/pubmed/29377512 http://dx.doi.org/10.1111/jcmm.13498 |
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author | Zhang, Yan Xie, Xiaoli Zeng, Jixiao Wu, Qiang Zhang, Ruizhong Zhu, Deli Xia, Huimin |
author_facet | Zhang, Yan Xie, Xiaoli Zeng, Jixiao Wu, Qiang Zhang, Ruizhong Zhu, Deli Xia, Huimin |
author_sort | Zhang, Yan |
collection | PubMed |
description | Hirschsprung disease (HSCR) is a genetic disorder characterized by the absence of enteric ganglia. There are more than 15 genes identified as contributed to HSCR by family‐based or population‐based approaches. However, these findings were not fulfilled to explain the heritability of most sporadic cases. In this study, using 1470 HSCR and 1473 control subjects in South Chinese population, we replicated two variants in NRG1 (rs16879552, P = 1.05E‐04 and rs7835688, P = 1.19E‐07), and further clarified the two replicated SNPs were more essential for patients with short‐segment aganglionosis (SHSCR) (P = 2.37E‐05). We also tried to replicate the most prominent signal (rs7785360) in AUTS2, which was a potential susceptibility gene with HSCR. In our results, in terms of individual association, marginal effect was observed to affect the HSCR patients following recessive model (P = 0.089). Noteworthy, significant intergenic synergistic effect between rs16879552 (NRG1) and rs7785360 (AUTS2) was identified through cross‐validation by logistic regression (P = 2.45E‐03, OR = 1.53) and multifactor dimensionality reduction (MDR, P < 0.0001, OR = 1.77). Significant correlation was observed between expression of these two genes in the normal segments of the colons (P = 0.018), together with differential expression of these genes between aganglionic colonic segments and normal colonic segments of the HSCR patients (P value for AUTS2 <0.0001, P value for NRG1 = 0.0243). Although functional evaluation is required, we supply new evidence for the NRG1 to HSCR and raised up a new susceptibility gene AUTS2 to a specific symptom for the disease. |
format | Online Article Text |
id | pubmed-5867083 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-58670832018-04-01 Association of NRG1 and AUTS2 genetic polymorphisms with Hirschsprung disease in a South Chinese population Zhang, Yan Xie, Xiaoli Zeng, Jixiao Wu, Qiang Zhang, Ruizhong Zhu, Deli Xia, Huimin J Cell Mol Med Original Articles Hirschsprung disease (HSCR) is a genetic disorder characterized by the absence of enteric ganglia. There are more than 15 genes identified as contributed to HSCR by family‐based or population‐based approaches. However, these findings were not fulfilled to explain the heritability of most sporadic cases. In this study, using 1470 HSCR and 1473 control subjects in South Chinese population, we replicated two variants in NRG1 (rs16879552, P = 1.05E‐04 and rs7835688, P = 1.19E‐07), and further clarified the two replicated SNPs were more essential for patients with short‐segment aganglionosis (SHSCR) (P = 2.37E‐05). We also tried to replicate the most prominent signal (rs7785360) in AUTS2, which was a potential susceptibility gene with HSCR. In our results, in terms of individual association, marginal effect was observed to affect the HSCR patients following recessive model (P = 0.089). Noteworthy, significant intergenic synergistic effect between rs16879552 (NRG1) and rs7785360 (AUTS2) was identified through cross‐validation by logistic regression (P = 2.45E‐03, OR = 1.53) and multifactor dimensionality reduction (MDR, P < 0.0001, OR = 1.77). Significant correlation was observed between expression of these two genes in the normal segments of the colons (P = 0.018), together with differential expression of these genes between aganglionic colonic segments and normal colonic segments of the HSCR patients (P value for AUTS2 <0.0001, P value for NRG1 = 0.0243). Although functional evaluation is required, we supply new evidence for the NRG1 to HSCR and raised up a new susceptibility gene AUTS2 to a specific symptom for the disease. John Wiley and Sons Inc. 2018-01-29 2018-04 /pmc/articles/PMC5867083/ /pubmed/29377512 http://dx.doi.org/10.1111/jcmm.13498 Text en © 2018 The Authors. Journal of Cellular and Molecular Medicine published by John Wiley & Sons Ltd and Foundation for Cellular and Molecular Medicine. This is an open access article under the terms of the Creative Commons Attribution (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Articles Zhang, Yan Xie, Xiaoli Zeng, Jixiao Wu, Qiang Zhang, Ruizhong Zhu, Deli Xia, Huimin Association of NRG1 and AUTS2 genetic polymorphisms with Hirschsprung disease in a South Chinese population |
title | Association of NRG1 and AUTS2 genetic polymorphisms with Hirschsprung disease in a South Chinese population |
title_full | Association of NRG1 and AUTS2 genetic polymorphisms with Hirschsprung disease in a South Chinese population |
title_fullStr | Association of NRG1 and AUTS2 genetic polymorphisms with Hirschsprung disease in a South Chinese population |
title_full_unstemmed | Association of NRG1 and AUTS2 genetic polymorphisms with Hirschsprung disease in a South Chinese population |
title_short | Association of NRG1 and AUTS2 genetic polymorphisms with Hirschsprung disease in a South Chinese population |
title_sort | association of nrg1 and auts2 genetic polymorphisms with hirschsprung disease in a south chinese population |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5867083/ https://www.ncbi.nlm.nih.gov/pubmed/29377512 http://dx.doi.org/10.1111/jcmm.13498 |
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