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Association of NRG1 and AUTS2 genetic polymorphisms with Hirschsprung disease in a South Chinese population

Hirschsprung disease (HSCR) is a genetic disorder characterized by the absence of enteric ganglia. There are more than 15 genes identified as contributed to HSCR by family‐based or population‐based approaches. However, these findings were not fulfilled to explain the heritability of most sporadic ca...

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Autores principales: Zhang, Yan, Xie, Xiaoli, Zeng, Jixiao, Wu, Qiang, Zhang, Ruizhong, Zhu, Deli, Xia, Huimin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5867083/
https://www.ncbi.nlm.nih.gov/pubmed/29377512
http://dx.doi.org/10.1111/jcmm.13498
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author Zhang, Yan
Xie, Xiaoli
Zeng, Jixiao
Wu, Qiang
Zhang, Ruizhong
Zhu, Deli
Xia, Huimin
author_facet Zhang, Yan
Xie, Xiaoli
Zeng, Jixiao
Wu, Qiang
Zhang, Ruizhong
Zhu, Deli
Xia, Huimin
author_sort Zhang, Yan
collection PubMed
description Hirschsprung disease (HSCR) is a genetic disorder characterized by the absence of enteric ganglia. There are more than 15 genes identified as contributed to HSCR by family‐based or population‐based approaches. However, these findings were not fulfilled to explain the heritability of most sporadic cases. In this study, using 1470 HSCR and 1473 control subjects in South Chinese population, we replicated two variants in NRG1 (rs16879552, P = 1.05E‐04 and rs7835688, P = 1.19E‐07), and further clarified the two replicated SNPs were more essential for patients with short‐segment aganglionosis (SHSCR) (P = 2.37E‐05). We also tried to replicate the most prominent signal (rs7785360) in AUTS2, which was a potential susceptibility gene with HSCR. In our results, in terms of individual association, marginal effect was observed to affect the HSCR patients following recessive model (P = 0.089). Noteworthy, significant intergenic synergistic effect between rs16879552 (NRG1) and rs7785360 (AUTS2) was identified through cross‐validation by logistic regression (P = 2.45E‐03, OR = 1.53) and multifactor dimensionality reduction (MDR, P < 0.0001, OR = 1.77). Significant correlation was observed between expression of these two genes in the normal segments of the colons (P = 0.018), together with differential expression of these genes between aganglionic colonic segments and normal colonic segments of the HSCR patients (P value for AUTS2 <0.0001, P value for NRG1 = 0.0243). Although functional evaluation is required, we supply new evidence for the NRG1 to HSCR and raised up a new susceptibility gene AUTS2 to a specific symptom for the disease.
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spelling pubmed-58670832018-04-01 Association of NRG1 and AUTS2 genetic polymorphisms with Hirschsprung disease in a South Chinese population Zhang, Yan Xie, Xiaoli Zeng, Jixiao Wu, Qiang Zhang, Ruizhong Zhu, Deli Xia, Huimin J Cell Mol Med Original Articles Hirschsprung disease (HSCR) is a genetic disorder characterized by the absence of enteric ganglia. There are more than 15 genes identified as contributed to HSCR by family‐based or population‐based approaches. However, these findings were not fulfilled to explain the heritability of most sporadic cases. In this study, using 1470 HSCR and 1473 control subjects in South Chinese population, we replicated two variants in NRG1 (rs16879552, P = 1.05E‐04 and rs7835688, P = 1.19E‐07), and further clarified the two replicated SNPs were more essential for patients with short‐segment aganglionosis (SHSCR) (P = 2.37E‐05). We also tried to replicate the most prominent signal (rs7785360) in AUTS2, which was a potential susceptibility gene with HSCR. In our results, in terms of individual association, marginal effect was observed to affect the HSCR patients following recessive model (P = 0.089). Noteworthy, significant intergenic synergistic effect between rs16879552 (NRG1) and rs7785360 (AUTS2) was identified through cross‐validation by logistic regression (P = 2.45E‐03, OR = 1.53) and multifactor dimensionality reduction (MDR, P < 0.0001, OR = 1.77). Significant correlation was observed between expression of these two genes in the normal segments of the colons (P = 0.018), together with differential expression of these genes between aganglionic colonic segments and normal colonic segments of the HSCR patients (P value for AUTS2 <0.0001, P value for NRG1 = 0.0243). Although functional evaluation is required, we supply new evidence for the NRG1 to HSCR and raised up a new susceptibility gene AUTS2 to a specific symptom for the disease. John Wiley and Sons Inc. 2018-01-29 2018-04 /pmc/articles/PMC5867083/ /pubmed/29377512 http://dx.doi.org/10.1111/jcmm.13498 Text en © 2018 The Authors. Journal of Cellular and Molecular Medicine published by John Wiley & Sons Ltd and Foundation for Cellular and Molecular Medicine. This is an open access article under the terms of the Creative Commons Attribution (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Zhang, Yan
Xie, Xiaoli
Zeng, Jixiao
Wu, Qiang
Zhang, Ruizhong
Zhu, Deli
Xia, Huimin
Association of NRG1 and AUTS2 genetic polymorphisms with Hirschsprung disease in a South Chinese population
title Association of NRG1 and AUTS2 genetic polymorphisms with Hirschsprung disease in a South Chinese population
title_full Association of NRG1 and AUTS2 genetic polymorphisms with Hirschsprung disease in a South Chinese population
title_fullStr Association of NRG1 and AUTS2 genetic polymorphisms with Hirschsprung disease in a South Chinese population
title_full_unstemmed Association of NRG1 and AUTS2 genetic polymorphisms with Hirschsprung disease in a South Chinese population
title_short Association of NRG1 and AUTS2 genetic polymorphisms with Hirschsprung disease in a South Chinese population
title_sort association of nrg1 and auts2 genetic polymorphisms with hirschsprung disease in a south chinese population
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5867083/
https://www.ncbi.nlm.nih.gov/pubmed/29377512
http://dx.doi.org/10.1111/jcmm.13498
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