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(1)H, (15)N and (13)C backbone resonance assignments of pentaerythritol tetranitrate reductase from Enterobacter cloacae PB2

Pentaerythritol tetranitrate reductase (PETNR) is a flavoenzyme possessing a broad substrate specificity and is a member of the Old Yellow Enzyme family of oxidoreductases. As well as having high potential as an industrial biocatalyst, PETNR is an excellent model system for studying hydrogen transfe...

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Autores principales: Iorgu, Andreea I., Baxter, Nicola J., Cliff, Matthew J., Waltho, Jonathan P., Hay, Sam, Scrutton, Nigel S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Netherlands 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5869876/
https://www.ncbi.nlm.nih.gov/pubmed/29168057
http://dx.doi.org/10.1007/s12104-017-9791-2
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author Iorgu, Andreea I.
Baxter, Nicola J.
Cliff, Matthew J.
Waltho, Jonathan P.
Hay, Sam
Scrutton, Nigel S.
author_facet Iorgu, Andreea I.
Baxter, Nicola J.
Cliff, Matthew J.
Waltho, Jonathan P.
Hay, Sam
Scrutton, Nigel S.
author_sort Iorgu, Andreea I.
collection PubMed
description Pentaerythritol tetranitrate reductase (PETNR) is a flavoenzyme possessing a broad substrate specificity and is a member of the Old Yellow Enzyme family of oxidoreductases. As well as having high potential as an industrial biocatalyst, PETNR is an excellent model system for studying hydrogen transfer reactions. Mechanistic studies performed with PETNR using stopped-flow methods have shown that tunneling contributes towards hydride transfer from the NAD(P)H coenzyme to the flavin mononucleotide (FMN) cofactor and fast protein dynamics have been inferred to facilitate this catalytic step. Herein, we report the near-complete (1)H, (15)N and (13)C backbone resonance assignments of PETNR in a stoichiometric complex with the FMN cofactor in its native oxidized form, which were obtained using heteronuclear multidimensional NMR spectroscopy. A total of 97% of all backbone resonances were assigned, with 333 out of a possible 344 residues assigned in the (1)H–(15)N TROSY spectrum. This is the first report of an NMR structural study of a flavoenzyme from the Old Yellow Enzyme family and it lays the foundation for future investigations of functional dynamics in hydride transfer catalytic mechanism.
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spelling pubmed-58698762018-03-28 (1)H, (15)N and (13)C backbone resonance assignments of pentaerythritol tetranitrate reductase from Enterobacter cloacae PB2 Iorgu, Andreea I. Baxter, Nicola J. Cliff, Matthew J. Waltho, Jonathan P. Hay, Sam Scrutton, Nigel S. Biomol NMR Assign Article Pentaerythritol tetranitrate reductase (PETNR) is a flavoenzyme possessing a broad substrate specificity and is a member of the Old Yellow Enzyme family of oxidoreductases. As well as having high potential as an industrial biocatalyst, PETNR is an excellent model system for studying hydrogen transfer reactions. Mechanistic studies performed with PETNR using stopped-flow methods have shown that tunneling contributes towards hydride transfer from the NAD(P)H coenzyme to the flavin mononucleotide (FMN) cofactor and fast protein dynamics have been inferred to facilitate this catalytic step. Herein, we report the near-complete (1)H, (15)N and (13)C backbone resonance assignments of PETNR in a stoichiometric complex with the FMN cofactor in its native oxidized form, which were obtained using heteronuclear multidimensional NMR spectroscopy. A total of 97% of all backbone resonances were assigned, with 333 out of a possible 344 residues assigned in the (1)H–(15)N TROSY spectrum. This is the first report of an NMR structural study of a flavoenzyme from the Old Yellow Enzyme family and it lays the foundation for future investigations of functional dynamics in hydride transfer catalytic mechanism. Springer Netherlands 2017-11-22 2018 /pmc/articles/PMC5869876/ /pubmed/29168057 http://dx.doi.org/10.1007/s12104-017-9791-2 Text en © The Author(s) 2017 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
spellingShingle Article
Iorgu, Andreea I.
Baxter, Nicola J.
Cliff, Matthew J.
Waltho, Jonathan P.
Hay, Sam
Scrutton, Nigel S.
(1)H, (15)N and (13)C backbone resonance assignments of pentaerythritol tetranitrate reductase from Enterobacter cloacae PB2
title (1)H, (15)N and (13)C backbone resonance assignments of pentaerythritol tetranitrate reductase from Enterobacter cloacae PB2
title_full (1)H, (15)N and (13)C backbone resonance assignments of pentaerythritol tetranitrate reductase from Enterobacter cloacae PB2
title_fullStr (1)H, (15)N and (13)C backbone resonance assignments of pentaerythritol tetranitrate reductase from Enterobacter cloacae PB2
title_full_unstemmed (1)H, (15)N and (13)C backbone resonance assignments of pentaerythritol tetranitrate reductase from Enterobacter cloacae PB2
title_short (1)H, (15)N and (13)C backbone resonance assignments of pentaerythritol tetranitrate reductase from Enterobacter cloacae PB2
title_sort (1)h, (15)n and (13)c backbone resonance assignments of pentaerythritol tetranitrate reductase from enterobacter cloacae pb2
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5869876/
https://www.ncbi.nlm.nih.gov/pubmed/29168057
http://dx.doi.org/10.1007/s12104-017-9791-2
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