Fuento: functional enrichment for bioinformatics

SUMMARY: The currently available functional enrichment software focuses mostly on gene expression analysis, whereby server- and graphical-user-interface-based tools with specific scope dominate the field. Here we present an efficient, user-friendly, multifunctional command-line-based functional enri...

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Detalles Bibliográficos
Autores principales: Weichselbaum, David, Zagrovic, Bojan, Polyansky, Anton A
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2017
Materias:
Applications Notes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5870553/
https://www.ncbi.nlm.nih.gov/pubmed/28379299
http://dx.doi.org/10.1093/bioinformatics/btx179
Descripción
Sumario:SUMMARY: The currently available functional enrichment software focuses mostly on gene expression analysis, whereby server- and graphical-user-interface-based tools with specific scope dominate the field. Here we present an efficient, user-friendly, multifunctional command-line-based functional enrichment tool (fu-en-to), tailored for the bioinformatics researcher. AVAILABILITY AND IMPLEMENTATION: Source code and binaries freely available for download at github.com/DavidWeichselbaum/fuento, implemented in C ++ and supported on Linux and OS X.

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