HiC-spector: a matrix library for spectral and reproducibility analysis of Hi-C contact maps

SUMMARY: Genome-wide proximity ligation based assays like Hi-C have opened a window to the 3D organization of the genome. In so doing, they present data structures that are different from conventional 1D signal tracks. To exploit the 2D nature of Hi-C contact maps, matrix techniques like spectral an...

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Detalles Bibliográficos
Autores principales: Yan, Koon-Kiu, Yardımcı, Galip Gürkan, Yan, Chengfei, Noble, William S, Gerstein, Mark
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2017
Materias:
Applications Notes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5870694/
https://www.ncbi.nlm.nih.gov/pubmed/28369339
http://dx.doi.org/10.1093/bioinformatics/btx152

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5870694/
https://www.ncbi.nlm.nih.gov/pubmed/28369339
http://dx.doi.org/10.1093/bioinformatics/btx152

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