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Rapid and sensitive insulated isothermal PCR for point-of-need feline leukaemia virus detection
OBJECTIVES: Feline leukaemia virus (FeLV), a gamma retrovirus, causes diseases of the feline haematopoietic system that are invariably fatal. Rapid and accurate testing at the point-of-need (PON) supports prevention of virus spread and management of clinical disease. This study evaluated the perform...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
SAGE Publications
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5871024/ https://www.ncbi.nlm.nih.gov/pubmed/28589743 http://dx.doi.org/10.1177/1098612X17712847 |
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author | Wilkes, Rebecca P Anis, Eman Dunbar, Dawn Lee, Pei-Yu A Tsai, Yun-Long Lee, Fu-Chun Chang, Hsiao-Fen G Wang, Hwa-Tang T Graham, Elizabeth M |
author_facet | Wilkes, Rebecca P Anis, Eman Dunbar, Dawn Lee, Pei-Yu A Tsai, Yun-Long Lee, Fu-Chun Chang, Hsiao-Fen G Wang, Hwa-Tang T Graham, Elizabeth M |
author_sort | Wilkes, Rebecca P |
collection | PubMed |
description | OBJECTIVES: Feline leukaemia virus (FeLV), a gamma retrovirus, causes diseases of the feline haematopoietic system that are invariably fatal. Rapid and accurate testing at the point-of-need (PON) supports prevention of virus spread and management of clinical disease. This study evaluated the performance of an insulated isothermal PCR (iiPCR) that detects proviral DNA, and a reverse transcription (RT)-iiPCR that detects both viral RNA and proviral DNA, for FeLV detection at the PON. METHODS: Mycoplasma haemofelis, feline coronavirus, feline herpesvirus, feline calicivirus and feline immunodeficiency virus were used to test analytical specificity. In vitro transcribed RNA, artificial plasmid, FeLV strain American Type Culture Collection VR-719 and a clinical FeLV isolate were used in the analytical sensitivity assays. A retrospective study including 116 clinical plasma and serum samples that had been tested with virus isolation, real-time PCR and ELISA, and a prospective study including 150 clinical plasma and serum samples were implemented to evaluate the clinical performances of the iiPCR-based methods for FeLV detection. RESULTS: Ninety-five percent assay limit of detection was calculated to be 16 RNA and five DNA copies for the RT-iiPCR, and six DNA copies for the iiPCR. Both reactions had analytical sensitivity comparable to a reference real-time PCR (qPCR) and did not detect five non-target feline pathogens. The clinical performance of the RT-iiPCR and iiPCR had 98.82% agreement (kappa[κ] = 0.97) and 100% agreement (κ = 1.0), respectively, with the qPCR (n = 85). The agreement between an automatic nucleic extraction/RT-iiPCR system and virus isolation to detect FeLV in plasma or serum was 95.69% (κ = 0.95) and 98.67% (κ = 0.85) in a retrospective (n = 116) and a prospective (n = 150) study, respectively. CONCLUSIONS AND RELEVANCE: These results suggested that both RT-iiPCR and iiPCR assays can serve as reliable tools for PON FeLV detection. |
format | Online Article Text |
id | pubmed-5871024 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | SAGE Publications |
record_format | MEDLINE/PubMed |
spelling | pubmed-58710242018-04-04 Rapid and sensitive insulated isothermal PCR for point-of-need feline leukaemia virus detection Wilkes, Rebecca P Anis, Eman Dunbar, Dawn Lee, Pei-Yu A Tsai, Yun-Long Lee, Fu-Chun Chang, Hsiao-Fen G Wang, Hwa-Tang T Graham, Elizabeth M J Feline Med Surg Original Articles OBJECTIVES: Feline leukaemia virus (FeLV), a gamma retrovirus, causes diseases of the feline haematopoietic system that are invariably fatal. Rapid and accurate testing at the point-of-need (PON) supports prevention of virus spread and management of clinical disease. This study evaluated the performance of an insulated isothermal PCR (iiPCR) that detects proviral DNA, and a reverse transcription (RT)-iiPCR that detects both viral RNA and proviral DNA, for FeLV detection at the PON. METHODS: Mycoplasma haemofelis, feline coronavirus, feline herpesvirus, feline calicivirus and feline immunodeficiency virus were used to test analytical specificity. In vitro transcribed RNA, artificial plasmid, FeLV strain American Type Culture Collection VR-719 and a clinical FeLV isolate were used in the analytical sensitivity assays. A retrospective study including 116 clinical plasma and serum samples that had been tested with virus isolation, real-time PCR and ELISA, and a prospective study including 150 clinical plasma and serum samples were implemented to evaluate the clinical performances of the iiPCR-based methods for FeLV detection. RESULTS: Ninety-five percent assay limit of detection was calculated to be 16 RNA and five DNA copies for the RT-iiPCR, and six DNA copies for the iiPCR. Both reactions had analytical sensitivity comparable to a reference real-time PCR (qPCR) and did not detect five non-target feline pathogens. The clinical performance of the RT-iiPCR and iiPCR had 98.82% agreement (kappa[κ] = 0.97) and 100% agreement (κ = 1.0), respectively, with the qPCR (n = 85). The agreement between an automatic nucleic extraction/RT-iiPCR system and virus isolation to detect FeLV in plasma or serum was 95.69% (κ = 0.95) and 98.67% (κ = 0.85) in a retrospective (n = 116) and a prospective (n = 150) study, respectively. CONCLUSIONS AND RELEVANCE: These results suggested that both RT-iiPCR and iiPCR assays can serve as reliable tools for PON FeLV detection. SAGE Publications 2018-04 /pmc/articles/PMC5871024/ /pubmed/28589743 http://dx.doi.org/10.1177/1098612X17712847 Text en © The Author(s) 2017 https://creativecommons.org/licenses/by-nc/4.0/This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 License (http://www.creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ) which permits non-commercial use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access pages (https://us.sagepub.com/en-us/nam/open-access-at-sage). |
spellingShingle | Original Articles Wilkes, Rebecca P Anis, Eman Dunbar, Dawn Lee, Pei-Yu A Tsai, Yun-Long Lee, Fu-Chun Chang, Hsiao-Fen G Wang, Hwa-Tang T Graham, Elizabeth M Rapid and sensitive insulated isothermal PCR for point-of-need feline leukaemia virus detection |
title | Rapid and sensitive insulated isothermal PCR for point-of-need feline
leukaemia virus detection |
title_full | Rapid and sensitive insulated isothermal PCR for point-of-need feline
leukaemia virus detection |
title_fullStr | Rapid and sensitive insulated isothermal PCR for point-of-need feline
leukaemia virus detection |
title_full_unstemmed | Rapid and sensitive insulated isothermal PCR for point-of-need feline
leukaemia virus detection |
title_short | Rapid and sensitive insulated isothermal PCR for point-of-need feline
leukaemia virus detection |
title_sort | rapid and sensitive insulated isothermal pcr for point-of-need feline
leukaemia virus detection |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5871024/ https://www.ncbi.nlm.nih.gov/pubmed/28589743 http://dx.doi.org/10.1177/1098612X17712847 |
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