Cargando…
Bacterial diversity and community structure in the rhizosphere of four Ferula species
The medicinal value of the Ferula L. has been recognized for more than a thousand years. Wild stocks of Ferula have declined dramatically because high economic value has led to overharvesting. The objective of this study was to compare the rhizosphere microbial community of four Ferula species [F. s...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5871818/ https://www.ncbi.nlm.nih.gov/pubmed/29593299 http://dx.doi.org/10.1038/s41598-018-22802-y |
_version_ | 1783309703869104128 |
---|---|
author | Wang, Xiuling Wang, Zhongke Jiang, Ping He, Yaling Mu, Yudi Lv, Xinhua Zhuang, Li |
author_facet | Wang, Xiuling Wang, Zhongke Jiang, Ping He, Yaling Mu, Yudi Lv, Xinhua Zhuang, Li |
author_sort | Wang, Xiuling |
collection | PubMed |
description | The medicinal value of the Ferula L. has been recognized for more than a thousand years. Wild stocks of Ferula have declined dramatically because high economic value has led to overharvesting. The objective of this study was to compare the rhizosphere microbial community of four Ferula species [F. syreitschikowii K.-Pol., F. gracilis (Ledeb.) Ledeb., F. ferulaeoides (Steud.) Korov., and F. lehmannii Boiss.] in the northern part of Xinjiang, China. The 16S rRNA sequences of rhizosphere bacteria were obtained with an Illumina paired-end sequence platform. Analysis was conducted to determine the richness and diversity of the rhizosphere bacterial communities. Two-way ANOVA indicated that plant species and soil depth had no significant effect on the alpha diversity of rhizobacteria. Linear discriminant analysis effect size showed that F. lehmannii followed by F. ferulaeoides had the most biomarkers and the highest taxon level, F. syreitschikowii and F. gracilis the least, while F. syreitschikowii and F. gracilis had the least property. This trend is consistent with reports that the medicinal value of F. lehmannii and F. ferulaeoides is greater than that of F. gracilis and F. syreitschikowii. The results of this study provide information that could be used for the commercial cultivation of Ferula spp. |
format | Online Article Text |
id | pubmed-5871818 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-58718182018-04-02 Bacterial diversity and community structure in the rhizosphere of four Ferula species Wang, Xiuling Wang, Zhongke Jiang, Ping He, Yaling Mu, Yudi Lv, Xinhua Zhuang, Li Sci Rep Article The medicinal value of the Ferula L. has been recognized for more than a thousand years. Wild stocks of Ferula have declined dramatically because high economic value has led to overharvesting. The objective of this study was to compare the rhizosphere microbial community of four Ferula species [F. syreitschikowii K.-Pol., F. gracilis (Ledeb.) Ledeb., F. ferulaeoides (Steud.) Korov., and F. lehmannii Boiss.] in the northern part of Xinjiang, China. The 16S rRNA sequences of rhizosphere bacteria were obtained with an Illumina paired-end sequence platform. Analysis was conducted to determine the richness and diversity of the rhizosphere bacterial communities. Two-way ANOVA indicated that plant species and soil depth had no significant effect on the alpha diversity of rhizobacteria. Linear discriminant analysis effect size showed that F. lehmannii followed by F. ferulaeoides had the most biomarkers and the highest taxon level, F. syreitschikowii and F. gracilis the least, while F. syreitschikowii and F. gracilis had the least property. This trend is consistent with reports that the medicinal value of F. lehmannii and F. ferulaeoides is greater than that of F. gracilis and F. syreitschikowii. The results of this study provide information that could be used for the commercial cultivation of Ferula spp. Nature Publishing Group UK 2018-03-28 /pmc/articles/PMC5871818/ /pubmed/29593299 http://dx.doi.org/10.1038/s41598-018-22802-y Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Wang, Xiuling Wang, Zhongke Jiang, Ping He, Yaling Mu, Yudi Lv, Xinhua Zhuang, Li Bacterial diversity and community structure in the rhizosphere of four Ferula species |
title | Bacterial diversity and community structure in the rhizosphere of four Ferula species |
title_full | Bacterial diversity and community structure in the rhizosphere of four Ferula species |
title_fullStr | Bacterial diversity and community structure in the rhizosphere of four Ferula species |
title_full_unstemmed | Bacterial diversity and community structure in the rhizosphere of four Ferula species |
title_short | Bacterial diversity and community structure in the rhizosphere of four Ferula species |
title_sort | bacterial diversity and community structure in the rhizosphere of four ferula species |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5871818/ https://www.ncbi.nlm.nih.gov/pubmed/29593299 http://dx.doi.org/10.1038/s41598-018-22802-y |
work_keys_str_mv | AT wangxiuling bacterialdiversityandcommunitystructureintherhizosphereoffourferulaspecies AT wangzhongke bacterialdiversityandcommunitystructureintherhizosphereoffourferulaspecies AT jiangping bacterialdiversityandcommunitystructureintherhizosphereoffourferulaspecies AT heyaling bacterialdiversityandcommunitystructureintherhizosphereoffourferulaspecies AT muyudi bacterialdiversityandcommunitystructureintherhizosphereoffourferulaspecies AT lvxinhua bacterialdiversityandcommunitystructureintherhizosphereoffourferulaspecies AT zhuangli bacterialdiversityandcommunitystructureintherhizosphereoffourferulaspecies |