Cargando…

HLA and proteasome expression body map

BACKGROUND: The presentation of HLA peptide complexes to T cells is a highly regulated and tissue specific process involving multiple transcriptionally controlled cellular components. The extensive polymorphism of HLA genes and the complex composition of the proteasome make it difficult to map their...

Descripción completa

Detalles Bibliográficos
Autores principales:	Boegel, Sebastian, Löwer, Martin, Bukur, Thomas, Sorn, Patrick, Castle, John C., Sahin, Ugur
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2018
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5872580/ https://www.ncbi.nlm.nih.gov/pubmed/29587858 http://dx.doi.org/10.1186/s12920-018-0354-x

Ejemplares similares

A catalog of HLA type, HLA expression, and neo-epitope candidates in human cancer cell lines
por: Boegel, Sebastian, et al.
Publicado: (2014)

TCLP: an online cancer cell line catalogue integrating HLA type, predicted neo-epitopes, virus and gene expression
por: Scholtalbers, Jelle, et al.
Publicado: (2015)

HLA typing from RNA-Seq sequence reads
por: Boegel, Sebastian, et al.
Publicado: (2012)

Large-scale analysis of SARS-CoV-2 spike-glycoprotein mutants demonstrates the need for continuous screening of virus isolates
por: Schrörs, Barbara, et al.
Publicado: (2021)

Immunomic, genomic and transcriptomic characterization of CT26 colorectal carcinoma
por: Castle, John C, et al.
Publicado: (2014)

Multi-Omics Characterization of the 4T1 Murine Mammary Gland Tumor Model
por: Schrörs, Barbara, et al.
Publicado: (2020)

CoVigator—A Knowledge Base for Navigating SARS-CoV-2 Genomic Variants
por: Bukur, Thomas, et al.
Publicado: (2023)

Mutanome Engineered RNA Immunotherapy: Towards Patient-Centered Tumor Vaccination
por: Vormehr, Mathias, et al.
Publicado: (2015)

Multiple instance learning to predict immune checkpoint blockade efficacy using neoantigen candidates
por: Lang, Franziska, et al.
Publicado: (2023)

Mutated tumor alleles are expressed according to their DNA frequency
por: Castle, John C., et al.
Publicado: (2014)

Current status of use of high throughput nucleotide sequencing in rheumatology
por: Boegel, Sebastian, et al.
Publicado: (2021)

rapmad: Robust analysis of peptide microarray data
por: Renard, Bernhard Y, et al.
Publicado: (2011)

Comprehensive Genomic and Transcriptomic Analysis of Three Synchronous Primary Tumours and a Recurrence from a Head and Neck Cancer Patient
por: Bresadola, Luisa, et al.
Publicado: (2021)

Estimating the Contribution of Proteasomal Spliced Peptides to the HLA-I Ligandome*
por: Mylonas, Roman, et al.
Publicado: (2018)

HLA-E expression and its clinical relevance in human renal cell carcinoma
por: Seliger, Barbara, et al.
Publicado: (2016)

HPV16 RNA-LPX vaccine mediates complete regression of aggressively growing HPV-positive mouse tumors and establishes protective T cell memory
por: Grunwitz, Christian, et al.
Publicado: (2019)

Enhanced protection of C57 BL/6 vs Balb/c mice to melanoma liver metastasis is mediated by NK cells
por: Foerster, Friedrich, et al.
Publicado: (2017)

Confidence-based Somatic Mutation Evaluation and Prioritization
por: Löwer, Martin, et al.
Publicado: (2012)

Targeting the tumor mutanome for personalized vaccination therapy
por: Kreiter, Sebastian, et al.
Publicado: (2012)

Distinct Molecular Mechanisms of Altered HLA Class II Expression in Malignant Melanoma
por: Meyer, Stefanie, et al.
Publicado: (2021)

NeoFox: annotating neoantigen candidates with neoantigen features
por: Lang, Franziska, et al.
Publicado: (2021)

A liposomal RNA vaccine inducing neoantigen-specific CD4(+) T cells augments the antitumor activity of local radiotherapy in mice
por: Salomon, Nadja, et al.
Publicado: (2020)

Tumor Microenvironment, HLA Class I and APM Expression in HPV-Negative Oral Squamous Cell Carcinoma
por: Wickenhauser, Claudia, et al.
Publicado: (2021)

Reduction of RPT6/S8 (a Proteasome Component) and Proteasome Activity in the Cortex is Associated with Cognitive Impairment in Lewy Body Dementia
por: Alghamdi, Amani, et al.
Publicado: (2017)

Integrative analysis of structural variations using short-reads and linked-reads yields highly specific and sensitive predictions
por: Sethi, Riccha, et al.
Publicado: (2020)

HLA-G-specific microRNAs a novel approach for targeting tumors
por: Jasinski-Bergner, Simon, et al.
Publicado: (2013)

Expression estimation and eQTL mapping for HLA genes with a personalized pipeline
por: Aguiar, Vitor R. C., et al.
Publicado: (2019)

OXPHOS remodeling in high-grade prostate cancer involves mtDNA mutations and increased succinate oxidation
por: Schöpf, Bernd, et al.
Publicado: (2020)

High Levels of Serum Ubiquitin and Proteasome in a Case of HLA-B27 Uveitis
por: Rossi, Settimio, et al.
Publicado: (2017)

Transcriptome analysis of renal ischemia/reperfusion (I/R) injury in BAFF and BAFF-R deficient mice
por: Möckel, Tamara, et al.
Publicado: (2023)

Increased HLA-DR expression and cortical demyelination in MS links with HLA-DR15
por: Enz, Lukas Simon, et al.
Publicado: (2019)

Dynamic Regulation of Proteasome Expression
por: Motosugi, Ryo, et al.
Publicado: (2019)

Fine-Mapping the Genetic Association of the Major Histocompatibility Complex in Multiple Sclerosis: HLA and Non-HLA Effects
por: Patsopoulos, Nikolaos A., et al.
Publicado: (2013)

MC38 colorectal tumor cell lines from two different sources display substantial differences in transcriptome, mutanome and neoantigen expression
por: Schrörs, Barbara, et al.
Publicado: (2023)

Efficient Identification of Novel Hla-A*0201–Presented Cytotoxic T Lymphocyte Epitopes in the Widely Expressed Tumor Antigen Prame by Proteasome-Mediated Digestion Analysis
por: Kessler, Jan H., et al.
Publicado: (2001)

The prevalence of antibodies against the HLA-DRB3 protein in kidney transplantation and the correlation with HLA expression
por: Habets, Thomas H. P. M., et al.
Publicado: (2018)

HLA expression in human hepatocellular carcinoma.
por: Paterson, A. C., et al.
Publicado: (1988)

Proteasome mapping reveals sexual dimorphism in tissue‐specific sensitivity to protein aggregations
por: Jenkins, Edmund Charles, et al.
Publicado: (2020)

Mapping the genetic diversity of HLA haplotypes in the Japanese populations
por: Saw, Woei-Yuh, et al.
Publicado: (2015)

Fine mapping of the HLA locus in Parkinson’s disease in Europeans
por: Yu, Eric, et al.
Publicado: (2021)

Cannot write session to /tmp/vufind_sessions/sess_m7ahhketaj0e9nge55ip81ntsl