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Genomic profiling of bovine corpus luteum maturation

To unveil novel global changes associated with corpus luteum (CL) maturation, we analyzed transcriptome data for the bovine CL on days 4 and 11, representing the developing vs. mature gland. Our analyses revealed 681 differentially expressed genes (363 and 318 on day 4 and 11, respectively), with ≥2...

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Autores principales: Kfir, Sigal, Basavaraja, Raghavendra, Wigoda, Noa, Ben-Dor, Shifra, Orr, Irit, Meidan, Rina
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5874041/
https://www.ncbi.nlm.nih.gov/pubmed/29590145
http://dx.doi.org/10.1371/journal.pone.0194456
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author Kfir, Sigal
Basavaraja, Raghavendra
Wigoda, Noa
Ben-Dor, Shifra
Orr, Irit
Meidan, Rina
author_facet Kfir, Sigal
Basavaraja, Raghavendra
Wigoda, Noa
Ben-Dor, Shifra
Orr, Irit
Meidan, Rina
author_sort Kfir, Sigal
collection PubMed
description To unveil novel global changes associated with corpus luteum (CL) maturation, we analyzed transcriptome data for the bovine CL on days 4 and 11, representing the developing vs. mature gland. Our analyses revealed 681 differentially expressed genes (363 and 318 on day 4 and 11, respectively), with ≥2 fold change and FDR of <5%. Different gene ontology (GO) categories were represented prominently in transcriptome data at these stages (e.g. days 4: cell cycle, chromosome, DNA metabolic process and replication and on day 11: immune response; lipid metabolic process and complement activation). Based on bioinformatic analyses, select genes expression in day 4 and 11 CL was validated with quantitative real-time PCR. Cell specific expression was also determined in enriched luteal endothelial and steroidogenic cells. Genes related to the angiogenic process such as NOS3, which maintains dilated vessels and MMP9, matrix degrading enzyme, were higher on day 4. Importantly, our data suggests day 11 CL acquire mechanisms to prevent blood vessel sprouting and promote their maturation by expressing NOTCH4 and JAG1, greatly enriched in luteal endothelial cells. Another endothelial specific gene, CD300LG, was identified here in the CL for the first time. CD300LG is an adhesion molecule enabling lymphocyte migration, its higher levels at mid cycle are expected to support the transmigration of immune cells into the CL at this stage. Together with steroidogenic genes, most of the genes regulating de-novo cholesterol biosynthetic pathway (e.g HMGCS, HMGCR) and cholesterol uptake from plasma (LDLR, APOD and APOE) were upregulated in the mature CL. These findings provide new insight of the processes involved in CL maturation including blood vessel growth and stabilization, leucocyte transmigration as well as progesterone synthesis as the CL matures.
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spelling pubmed-58740412018-04-06 Genomic profiling of bovine corpus luteum maturation Kfir, Sigal Basavaraja, Raghavendra Wigoda, Noa Ben-Dor, Shifra Orr, Irit Meidan, Rina PLoS One Research Article To unveil novel global changes associated with corpus luteum (CL) maturation, we analyzed transcriptome data for the bovine CL on days 4 and 11, representing the developing vs. mature gland. Our analyses revealed 681 differentially expressed genes (363 and 318 on day 4 and 11, respectively), with ≥2 fold change and FDR of <5%. Different gene ontology (GO) categories were represented prominently in transcriptome data at these stages (e.g. days 4: cell cycle, chromosome, DNA metabolic process and replication and on day 11: immune response; lipid metabolic process and complement activation). Based on bioinformatic analyses, select genes expression in day 4 and 11 CL was validated with quantitative real-time PCR. Cell specific expression was also determined in enriched luteal endothelial and steroidogenic cells. Genes related to the angiogenic process such as NOS3, which maintains dilated vessels and MMP9, matrix degrading enzyme, were higher on day 4. Importantly, our data suggests day 11 CL acquire mechanisms to prevent blood vessel sprouting and promote their maturation by expressing NOTCH4 and JAG1, greatly enriched in luteal endothelial cells. Another endothelial specific gene, CD300LG, was identified here in the CL for the first time. CD300LG is an adhesion molecule enabling lymphocyte migration, its higher levels at mid cycle are expected to support the transmigration of immune cells into the CL at this stage. Together with steroidogenic genes, most of the genes regulating de-novo cholesterol biosynthetic pathway (e.g HMGCS, HMGCR) and cholesterol uptake from plasma (LDLR, APOD and APOE) were upregulated in the mature CL. These findings provide new insight of the processes involved in CL maturation including blood vessel growth and stabilization, leucocyte transmigration as well as progesterone synthesis as the CL matures. Public Library of Science 2018-03-28 /pmc/articles/PMC5874041/ /pubmed/29590145 http://dx.doi.org/10.1371/journal.pone.0194456 Text en © 2018 Kfir et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Kfir, Sigal
Basavaraja, Raghavendra
Wigoda, Noa
Ben-Dor, Shifra
Orr, Irit
Meidan, Rina
Genomic profiling of bovine corpus luteum maturation
title Genomic profiling of bovine corpus luteum maturation
title_full Genomic profiling of bovine corpus luteum maturation
title_fullStr Genomic profiling of bovine corpus luteum maturation
title_full_unstemmed Genomic profiling of bovine corpus luteum maturation
title_short Genomic profiling of bovine corpus luteum maturation
title_sort genomic profiling of bovine corpus luteum maturation
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5874041/
https://www.ncbi.nlm.nih.gov/pubmed/29590145
http://dx.doi.org/10.1371/journal.pone.0194456
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