Draft Genome Sequences of Two Novel Salmonella enterica subsp. enterica Strains Isolated from Low-Moisture Foods with Applications in Food Safety Research

The genomes of two strains of Salmonella enterica subsp. enterica serovar Cubana and serovar Muenchen, isolated from dry hazelnuts and chia seeds, respectively, were sequenced using the Illumina MiSeq platform, assembled de novo using the overlap-layout-consensus method, and aligned to their respect...

Descripción completa

Detalles Bibliográficos
Autores principales: Radford, Devon R., Leon-Velarde, Carlos G., Chen, Shu, Hamidi Oskouei, Amir M., Balamurugan, Sampathkumar
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2018
Materias:
Prokaryotes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5876487/
https://www.ncbi.nlm.nih.gov/pubmed/29599154
http://dx.doi.org/10.1128/genomeA.00183-18
_version_ 1783310519731486720
author Radford, Devon R.
Leon-Velarde, Carlos G.
Chen, Shu
Hamidi Oskouei, Amir M.
Balamurugan, Sampathkumar
author_facet Radford, Devon R.
Leon-Velarde, Carlos G.
Chen, Shu
Hamidi Oskouei, Amir M.
Balamurugan, Sampathkumar
author_sort Radford, Devon R.
collection PubMed
description The genomes of two strains of Salmonella enterica subsp. enterica serovar Cubana and serovar Muenchen, isolated from dry hazelnuts and chia seeds, respectively, were sequenced using the Illumina MiSeq platform, assembled de novo using the overlap-layout-consensus method, and aligned to their respective most identical sequence genome scaffolds using MUMMER and BLAST searches.
format Online
Article
Text
id pubmed-5876487
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher American Society for Microbiology
record_format MEDLINE/PubMed
spelling pubmed-58764872018-04-06 Draft Genome Sequences of Two Novel Salmonella enterica subsp. enterica Strains Isolated from Low-Moisture Foods with Applications in Food Safety Research Radford, Devon R. Leon-Velarde, Carlos G. Chen, Shu Hamidi Oskouei, Amir M. Balamurugan, Sampathkumar Genome Announc Prokaryotes The genomes of two strains of Salmonella enterica subsp. enterica serovar Cubana and serovar Muenchen, isolated from dry hazelnuts and chia seeds, respectively, were sequenced using the Illumina MiSeq platform, assembled de novo using the overlap-layout-consensus method, and aligned to their respective most identical sequence genome scaffolds using MUMMER and BLAST searches. American Society for Microbiology 2018-03-29 /pmc/articles/PMC5876487/ /pubmed/29599154 http://dx.doi.org/10.1128/genomeA.00183-18 Text en Copyright © 2018 Radford et al. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Prokaryotes
Radford, Devon R.
Leon-Velarde, Carlos G.
Chen, Shu
Hamidi Oskouei, Amir M.
Balamurugan, Sampathkumar
Draft Genome Sequences of Two Novel Salmonella enterica subsp. enterica Strains Isolated from Low-Moisture Foods with Applications in Food Safety Research
title Draft Genome Sequences of Two Novel Salmonella enterica subsp. enterica Strains Isolated from Low-Moisture Foods with Applications in Food Safety Research
title_full Draft Genome Sequences of Two Novel Salmonella enterica subsp. enterica Strains Isolated from Low-Moisture Foods with Applications in Food Safety Research
title_fullStr Draft Genome Sequences of Two Novel Salmonella enterica subsp. enterica Strains Isolated from Low-Moisture Foods with Applications in Food Safety Research
title_full_unstemmed Draft Genome Sequences of Two Novel Salmonella enterica subsp. enterica Strains Isolated from Low-Moisture Foods with Applications in Food Safety Research
title_short Draft Genome Sequences of Two Novel Salmonella enterica subsp. enterica Strains Isolated from Low-Moisture Foods with Applications in Food Safety Research
title_sort draft genome sequences of two novel salmonella enterica subsp. enterica strains isolated from low-moisture foods with applications in food safety research
topic Prokaryotes
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5876487/
https://www.ncbi.nlm.nih.gov/pubmed/29599154
http://dx.doi.org/10.1128/genomeA.00183-18
work_keys_str_mv AT radforddevonr draftgenomesequencesoftwonovelsalmonellaentericasubspentericastrainsisolatedfromlowmoisturefoodswithapplicationsinfoodsafetyresearch
AT leonvelardecarlosg draftgenomesequencesoftwonovelsalmonellaentericasubspentericastrainsisolatedfromlowmoisturefoodswithapplicationsinfoodsafetyresearch
AT chenshu draftgenomesequencesoftwonovelsalmonellaentericasubspentericastrainsisolatedfromlowmoisturefoodswithapplicationsinfoodsafetyresearch
AT hamidioskoueiamirm draftgenomesequencesoftwonovelsalmonellaentericasubspentericastrainsisolatedfromlowmoisturefoodswithapplicationsinfoodsafetyresearch
AT balamurugansampathkumar draftgenomesequencesoftwonovelsalmonellaentericasubspentericastrainsisolatedfromlowmoisturefoodswithapplicationsinfoodsafetyresearch

Ejemplares similares