Cargando…

Prospective forecasts of annual dengue hemorrhagic fever incidence in Thailand, 2010–2014

Dengue hemorrhagic fever (DHF), a severe manifestation of dengue viral infection that can cause severe bleeding, organ impairment, and even death, affects between 15,000 and 105,000 people each year in Thailand. While all Thai provinces experience at least one DHF case most years, the distribution o...

Descripción completa

Detalles Bibliográficos
Autores principales: Lauer, Stephen A., Sakrejda, Krzysztof, Ray, Evan L., Keegan, Lindsay T., Bi, Qifang, Suangtho, Paphanij, Hinjoy, Soawapak, Iamsirithaworn, Sopon, Suthachana, Suthanun, Laosiritaworn, Yongjua, Cummings, Derek A.T., Lessler, Justin, Reich, Nicholas G.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: National Academy of Sciences 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5877997/
https://www.ncbi.nlm.nih.gov/pubmed/29463757
http://dx.doi.org/10.1073/pnas.1714457115
_version_ 1783310798308769792
author Lauer, Stephen A.
Sakrejda, Krzysztof
Ray, Evan L.
Keegan, Lindsay T.
Bi, Qifang
Suangtho, Paphanij
Hinjoy, Soawapak
Iamsirithaworn, Sopon
Suthachana, Suthanun
Laosiritaworn, Yongjua
Cummings, Derek A.T.
Lessler, Justin
Reich, Nicholas G.
author_facet Lauer, Stephen A.
Sakrejda, Krzysztof
Ray, Evan L.
Keegan, Lindsay T.
Bi, Qifang
Suangtho, Paphanij
Hinjoy, Soawapak
Iamsirithaworn, Sopon
Suthachana, Suthanun
Laosiritaworn, Yongjua
Cummings, Derek A.T.
Lessler, Justin
Reich, Nicholas G.
author_sort Lauer, Stephen A.
collection PubMed
description Dengue hemorrhagic fever (DHF), a severe manifestation of dengue viral infection that can cause severe bleeding, organ impairment, and even death, affects between 15,000 and 105,000 people each year in Thailand. While all Thai provinces experience at least one DHF case most years, the distribution of cases shifts regionally from year to year. Accurately forecasting where DHF outbreaks occur before the dengue season could help public health officials prioritize public health activities. We develop statistical models that use biologically plausible covariates, observed by April each year, to forecast the cumulative DHF incidence for the remainder of the year. We perform cross-validation during the training phase (2000–2009) to select the covariates for these models. A parsimonious model based on preseason incidence outperforms the 10-y median for 65% of province-level annual forecasts, reduces the mean absolute error by 19%, and successfully forecasts outbreaks (area under the receiver operating characteristic curve = 0.84) over the testing period (2010–2014). We find that functions of past incidence contribute most strongly to model performance, whereas the importance of environmental covariates varies regionally. This work illustrates that accurate forecasts of dengue risk are possible in a policy-relevant timeframe.
format Online
Article
Text
id pubmed-5877997
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher National Academy of Sciences
record_format MEDLINE/PubMed
spelling pubmed-58779972018-04-02 Prospective forecasts of annual dengue hemorrhagic fever incidence in Thailand, 2010–2014 Lauer, Stephen A. Sakrejda, Krzysztof Ray, Evan L. Keegan, Lindsay T. Bi, Qifang Suangtho, Paphanij Hinjoy, Soawapak Iamsirithaworn, Sopon Suthachana, Suthanun Laosiritaworn, Yongjua Cummings, Derek A.T. Lessler, Justin Reich, Nicholas G. Proc Natl Acad Sci U S A PNAS Plus Dengue hemorrhagic fever (DHF), a severe manifestation of dengue viral infection that can cause severe bleeding, organ impairment, and even death, affects between 15,000 and 105,000 people each year in Thailand. While all Thai provinces experience at least one DHF case most years, the distribution of cases shifts regionally from year to year. Accurately forecasting where DHF outbreaks occur before the dengue season could help public health officials prioritize public health activities. We develop statistical models that use biologically plausible covariates, observed by April each year, to forecast the cumulative DHF incidence for the remainder of the year. We perform cross-validation during the training phase (2000–2009) to select the covariates for these models. A parsimonious model based on preseason incidence outperforms the 10-y median for 65% of province-level annual forecasts, reduces the mean absolute error by 19%, and successfully forecasts outbreaks (area under the receiver operating characteristic curve = 0.84) over the testing period (2010–2014). We find that functions of past incidence contribute most strongly to model performance, whereas the importance of environmental covariates varies regionally. This work illustrates that accurate forecasts of dengue risk are possible in a policy-relevant timeframe. National Academy of Sciences 2018-03-06 2018-02-20 /pmc/articles/PMC5877997/ /pubmed/29463757 http://dx.doi.org/10.1073/pnas.1714457115 Text en Copyright © 2018 the Author(s). Published by PNAS. https://creativecommons.org/licenses/by-nc-nd/4.0/ This open access article is distributed under Creative Commons Attribution-NonCommercial-NoDerivatives License 4.0 (CC BY-NC-ND) (https://creativecommons.org/licenses/by-nc-nd/4.0/) .
spellingShingle PNAS Plus
Lauer, Stephen A.
Sakrejda, Krzysztof
Ray, Evan L.
Keegan, Lindsay T.
Bi, Qifang
Suangtho, Paphanij
Hinjoy, Soawapak
Iamsirithaworn, Sopon
Suthachana, Suthanun
Laosiritaworn, Yongjua
Cummings, Derek A.T.
Lessler, Justin
Reich, Nicholas G.
Prospective forecasts of annual dengue hemorrhagic fever incidence in Thailand, 2010–2014
title Prospective forecasts of annual dengue hemorrhagic fever incidence in Thailand, 2010–2014
title_full Prospective forecasts of annual dengue hemorrhagic fever incidence in Thailand, 2010–2014
title_fullStr Prospective forecasts of annual dengue hemorrhagic fever incidence in Thailand, 2010–2014
title_full_unstemmed Prospective forecasts of annual dengue hemorrhagic fever incidence in Thailand, 2010–2014
title_short Prospective forecasts of annual dengue hemorrhagic fever incidence in Thailand, 2010–2014
title_sort prospective forecasts of annual dengue hemorrhagic fever incidence in thailand, 2010–2014
topic PNAS Plus
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5877997/
https://www.ncbi.nlm.nih.gov/pubmed/29463757
http://dx.doi.org/10.1073/pnas.1714457115
work_keys_str_mv AT lauerstephena prospectiveforecastsofannualdenguehemorrhagicfeverincidenceinthailand20102014
AT sakrejdakrzysztof prospectiveforecastsofannualdenguehemorrhagicfeverincidenceinthailand20102014
AT rayevanl prospectiveforecastsofannualdenguehemorrhagicfeverincidenceinthailand20102014
AT keeganlindsayt prospectiveforecastsofannualdenguehemorrhagicfeverincidenceinthailand20102014
AT biqifang prospectiveforecastsofannualdenguehemorrhagicfeverincidenceinthailand20102014
AT suangthopaphanij prospectiveforecastsofannualdenguehemorrhagicfeverincidenceinthailand20102014
AT hinjoysoawapak prospectiveforecastsofannualdenguehemorrhagicfeverincidenceinthailand20102014
AT iamsirithawornsopon prospectiveforecastsofannualdenguehemorrhagicfeverincidenceinthailand20102014
AT suthachanasuthanun prospectiveforecastsofannualdenguehemorrhagicfeverincidenceinthailand20102014
AT laosiritawornyongjua prospectiveforecastsofannualdenguehemorrhagicfeverincidenceinthailand20102014
AT cummingsderekat prospectiveforecastsofannualdenguehemorrhagicfeverincidenceinthailand20102014
AT lesslerjustin prospectiveforecastsofannualdenguehemorrhagicfeverincidenceinthailand20102014
AT reichnicholasg prospectiveforecastsofannualdenguehemorrhagicfeverincidenceinthailand20102014