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Inferring forest fate from demographic data: from vital rates to population dynamic models
As population-level patterns of interest in forests emerge from individual vital rates, modelling forest dynamics requires making the link between the scales at which data are collected (individual stems) and the scales at which questions are asked (e.g. populations and communities). Structured popu...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5879618/ https://www.ncbi.nlm.nih.gov/pubmed/29514966 http://dx.doi.org/10.1098/rspb.2017.2050 |
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author | Needham, Jessica Merow, Cory Chang-Yang, Chia-Hao Caswell, Hal McMahon, Sean M. |
author_facet | Needham, Jessica Merow, Cory Chang-Yang, Chia-Hao Caswell, Hal McMahon, Sean M. |
author_sort | Needham, Jessica |
collection | PubMed |
description | As population-level patterns of interest in forests emerge from individual vital rates, modelling forest dynamics requires making the link between the scales at which data are collected (individual stems) and the scales at which questions are asked (e.g. populations and communities). Structured population models (e.g. integral projection models (IPMs)) are useful tools for linking vital rates to population dynamics. However, the application of such models to forest trees remains challenging owing to features of tree life cycles, such as slow growth, long lifespan and lack of data on crucial ontogenic stages. We developed a survival model that accounts for size-dependent mortality and a growth model that characterizes individual heterogeneity. We integrated vital rate models into two types of population model; an analytically tractable form of IPM and an individual-based model (IBM) that is applied with stochastic simulations. We calculated longevities, passage times to, and occupancy time in, different life cycle stages, important metrics for understanding how demographic rates translate into patterns of forest turnover and carbon residence times. Here, we illustrate the methods for three tropical forest species with varying life-forms. Population dynamics from IPMs and IBMs matched a 34 year time series of data (albeit a snapshot of the life cycle for canopy trees) and highlight differences in life-history strategies between species. Specifically, the greater variation in growth rates within the two canopy species suggests an ability to respond to available resources, which in turn manifests as faster passage times and greater occupancy times in larger size classes. The framework presented here offers a novel and accessible approach to modelling the population dynamics of forest trees. |
format | Online Article Text |
id | pubmed-5879618 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | The Royal Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-58796182018-04-09 Inferring forest fate from demographic data: from vital rates to population dynamic models Needham, Jessica Merow, Cory Chang-Yang, Chia-Hao Caswell, Hal McMahon, Sean M. Proc Biol Sci Ecology As population-level patterns of interest in forests emerge from individual vital rates, modelling forest dynamics requires making the link between the scales at which data are collected (individual stems) and the scales at which questions are asked (e.g. populations and communities). Structured population models (e.g. integral projection models (IPMs)) are useful tools for linking vital rates to population dynamics. However, the application of such models to forest trees remains challenging owing to features of tree life cycles, such as slow growth, long lifespan and lack of data on crucial ontogenic stages. We developed a survival model that accounts for size-dependent mortality and a growth model that characterizes individual heterogeneity. We integrated vital rate models into two types of population model; an analytically tractable form of IPM and an individual-based model (IBM) that is applied with stochastic simulations. We calculated longevities, passage times to, and occupancy time in, different life cycle stages, important metrics for understanding how demographic rates translate into patterns of forest turnover and carbon residence times. Here, we illustrate the methods for three tropical forest species with varying life-forms. Population dynamics from IPMs and IBMs matched a 34 year time series of data (albeit a snapshot of the life cycle for canopy trees) and highlight differences in life-history strategies between species. Specifically, the greater variation in growth rates within the two canopy species suggests an ability to respond to available resources, which in turn manifests as faster passage times and greater occupancy times in larger size classes. The framework presented here offers a novel and accessible approach to modelling the population dynamics of forest trees. The Royal Society 2018-03-14 2018-03-07 /pmc/articles/PMC5879618/ /pubmed/29514966 http://dx.doi.org/10.1098/rspb.2017.2050 Text en © 2018 The Authors. http://creativecommons.org/licenses/by/4.0/ Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/, which permits unrestricted use, provided the original author and source are credited. |
spellingShingle | Ecology Needham, Jessica Merow, Cory Chang-Yang, Chia-Hao Caswell, Hal McMahon, Sean M. Inferring forest fate from demographic data: from vital rates to population dynamic models |
title | Inferring forest fate from demographic data: from vital rates to population dynamic models |
title_full | Inferring forest fate from demographic data: from vital rates to population dynamic models |
title_fullStr | Inferring forest fate from demographic data: from vital rates to population dynamic models |
title_full_unstemmed | Inferring forest fate from demographic data: from vital rates to population dynamic models |
title_short | Inferring forest fate from demographic data: from vital rates to population dynamic models |
title_sort | inferring forest fate from demographic data: from vital rates to population dynamic models |
topic | Ecology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5879618/ https://www.ncbi.nlm.nih.gov/pubmed/29514966 http://dx.doi.org/10.1098/rspb.2017.2050 |
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