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Evolutionary engineering improves tolerance for medium-chain alcohols in Saccharomyces cerevisiae

BACKGROUND: Yeast-based chemical production is an environmentally friendly alternative to petroleum-based production or processes that involve harsh chemicals. However, many potential alcohol biofuels, such as n-butanol, isobutanol and n-hexanol, are toxic to production organisms, lowering the effic...

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Autores principales: Davis López, Stephanie A., Griffith, Douglas Andrew, Choi, Brian, Cate, Jamie H. D., Tullman-Ercek, Danielle
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5880003/
https://www.ncbi.nlm.nih.gov/pubmed/29619086
http://dx.doi.org/10.1186/s13068-018-1089-9
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author Davis López, Stephanie A.
Griffith, Douglas Andrew
Choi, Brian
Cate, Jamie H. D.
Tullman-Ercek, Danielle
author_facet Davis López, Stephanie A.
Griffith, Douglas Andrew
Choi, Brian
Cate, Jamie H. D.
Tullman-Ercek, Danielle
author_sort Davis López, Stephanie A.
collection PubMed
description BACKGROUND: Yeast-based chemical production is an environmentally friendly alternative to petroleum-based production or processes that involve harsh chemicals. However, many potential alcohol biofuels, such as n-butanol, isobutanol and n-hexanol, are toxic to production organisms, lowering the efficiency and cost-effectiveness of these processes. We set out to improve the tolerance of Saccharomyces cerevisiae toward these alcohols. RESULTS: We evolved the laboratory strain of S. cerevisiae BY4741 to be more tolerant toward n-hexanol and show that the mutations which confer tolerance occur in proteins of the translation initiation complex. We found that n-hexanol inhibits initiation of translation and evolved mutations in the α subunit of eIF2 and the γ subunit of its guanine exchange factor eIF2B rescue this inhibition. We further demonstrate that translation initiation is affected by other alcohols such as n-pentanol and n-heptanol, and that mutations in the eIF2 and eIF2B complexes greatly improve tolerance to these medium-chain alcohols. CONCLUSIONS: We successfully generated S. cerevisiae strains that have improved tolerance toward medium-chain alcohols and have demonstrated that the causative mutations overcome inhibition of translation initiation by these alcohols. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s13068-018-1089-9) contains supplementary material, which is available to authorized users.
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spelling pubmed-58800032018-04-04 Evolutionary engineering improves tolerance for medium-chain alcohols in Saccharomyces cerevisiae Davis López, Stephanie A. Griffith, Douglas Andrew Choi, Brian Cate, Jamie H. D. Tullman-Ercek, Danielle Biotechnol Biofuels Research BACKGROUND: Yeast-based chemical production is an environmentally friendly alternative to petroleum-based production or processes that involve harsh chemicals. However, many potential alcohol biofuels, such as n-butanol, isobutanol and n-hexanol, are toxic to production organisms, lowering the efficiency and cost-effectiveness of these processes. We set out to improve the tolerance of Saccharomyces cerevisiae toward these alcohols. RESULTS: We evolved the laboratory strain of S. cerevisiae BY4741 to be more tolerant toward n-hexanol and show that the mutations which confer tolerance occur in proteins of the translation initiation complex. We found that n-hexanol inhibits initiation of translation and evolved mutations in the α subunit of eIF2 and the γ subunit of its guanine exchange factor eIF2B rescue this inhibition. We further demonstrate that translation initiation is affected by other alcohols such as n-pentanol and n-heptanol, and that mutations in the eIF2 and eIF2B complexes greatly improve tolerance to these medium-chain alcohols. CONCLUSIONS: We successfully generated S. cerevisiae strains that have improved tolerance toward medium-chain alcohols and have demonstrated that the causative mutations overcome inhibition of translation initiation by these alcohols. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s13068-018-1089-9) contains supplementary material, which is available to authorized users. BioMed Central 2018-04-02 /pmc/articles/PMC5880003/ /pubmed/29619086 http://dx.doi.org/10.1186/s13068-018-1089-9 Text en © The Author(s) 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research
Davis López, Stephanie A.
Griffith, Douglas Andrew
Choi, Brian
Cate, Jamie H. D.
Tullman-Ercek, Danielle
Evolutionary engineering improves tolerance for medium-chain alcohols in Saccharomyces cerevisiae
title Evolutionary engineering improves tolerance for medium-chain alcohols in Saccharomyces cerevisiae
title_full Evolutionary engineering improves tolerance for medium-chain alcohols in Saccharomyces cerevisiae
title_fullStr Evolutionary engineering improves tolerance for medium-chain alcohols in Saccharomyces cerevisiae
title_full_unstemmed Evolutionary engineering improves tolerance for medium-chain alcohols in Saccharomyces cerevisiae
title_short Evolutionary engineering improves tolerance for medium-chain alcohols in Saccharomyces cerevisiae
title_sort evolutionary engineering improves tolerance for medium-chain alcohols in saccharomyces cerevisiae
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5880003/
https://www.ncbi.nlm.nih.gov/pubmed/29619086
http://dx.doi.org/10.1186/s13068-018-1089-9
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