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Development and validation of an automated algorithm to evaluate the abundance of bubbles in small bowel capsule endoscopy

BACKGROUND AND STUDY AIMS : Bubbles can impair visualization of the small bowel (SB) mucosa during capsule endoscopy (CE). We aimed to develop and validate a computed algorithm that would allow evaluation of the abundance of bubbles in SB-CE still frames. PATIENTS AND METHODS : Two sets of 200 SB-CE...

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Autores principales: Pietri, Olivia, Rezgui, Gada, Histace, Aymeric, Camus, Marine, Nion-Larmurier, Isabelle, Li, Cynthia, Becq, Aymeric, Abou Ali, Einas, Romain, Olivier, Chaput, Ulriikka, Marteau, Philippe, Florent, Christian, Dray, Xavier
Formato: Online Artículo Texto
Lenguaje:English
Publicado: © Georg Thieme Verlag KG 2018
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5880035/
https://www.ncbi.nlm.nih.gov/pubmed/29616238
http://dx.doi.org/10.1055/a-0573-1044
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author Pietri, Olivia
Rezgui, Gada
Histace, Aymeric
Camus, Marine
Nion-Larmurier, Isabelle
Li, Cynthia
Becq, Aymeric
Abou Ali, Einas
Romain, Olivier
Chaput, Ulriikka
Marteau, Philippe
Florent, Christian
Dray, Xavier
author_facet Pietri, Olivia
Rezgui, Gada
Histace, Aymeric
Camus, Marine
Nion-Larmurier, Isabelle
Li, Cynthia
Becq, Aymeric
Abou Ali, Einas
Romain, Olivier
Chaput, Ulriikka
Marteau, Philippe
Florent, Christian
Dray, Xavier
author_sort Pietri, Olivia
collection PubMed
description BACKGROUND AND STUDY AIMS : Bubbles can impair visualization of the small bowel (SB) mucosa during capsule endoscopy (CE). We aimed to develop and validate a computed algorithm that would allow evaluation of the abundance of bubbles in SB-CE still frames. PATIENTS AND METHODS : Two sets of 200 SB-CE normal still frames were created. Two experienced SB-CE readers analyzed both sets of images twice, in a random order. Each still frame was categorized as presenting with < 10 % or ≥ 10 % of bubbles. Reproducibility (κ), sensitivity (Se), specificity (Sp), receiver operating characteristic curve, and calculation time were measured for different algorithms (Grey-level of co-occurrence matrix [GLCM], fractal dimension, Hough transform, and speeded-up robust features [SURF]) using the experts’ analysis as reference. Algorithms with highest reproducibility, Se and Sp were then selected for a validation step on the second set of frames. Criteria for validation were κ = 1, Se ≥ 90 %, Sp ≥ 85 %, and a calculation time < 1 second. RESULTS : Both SURF and GLCM algorithms had high operating points (Se and Sp over 90 %) and a perfect reproducibility (κ = 1). The validation step showed the GLCM detector strategy had the best diagnostic performances, with a Se of 95.79 %, a Sp of 95.19 %, and a calculation time of 0.037 seconds per frame. CONCLUSION : A computed algorithm based on a GLCM detector strategy had high diagnostic performance allowing assessment of the abundance of bubbles in SB-CE still frames. This algorithm could be of interest for clinical use (quality reporting) and for research purposes (objective comparison tool of different preparations).
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spelling pubmed-58800352018-04-03 Development and validation of an automated algorithm to evaluate the abundance of bubbles in small bowel capsule endoscopy Pietri, Olivia Rezgui, Gada Histace, Aymeric Camus, Marine Nion-Larmurier, Isabelle Li, Cynthia Becq, Aymeric Abou Ali, Einas Romain, Olivier Chaput, Ulriikka Marteau, Philippe Florent, Christian Dray, Xavier Endosc Int Open BACKGROUND AND STUDY AIMS : Bubbles can impair visualization of the small bowel (SB) mucosa during capsule endoscopy (CE). We aimed to develop and validate a computed algorithm that would allow evaluation of the abundance of bubbles in SB-CE still frames. PATIENTS AND METHODS : Two sets of 200 SB-CE normal still frames were created. Two experienced SB-CE readers analyzed both sets of images twice, in a random order. Each still frame was categorized as presenting with < 10 % or ≥ 10 % of bubbles. Reproducibility (κ), sensitivity (Se), specificity (Sp), receiver operating characteristic curve, and calculation time were measured for different algorithms (Grey-level of co-occurrence matrix [GLCM], fractal dimension, Hough transform, and speeded-up robust features [SURF]) using the experts’ analysis as reference. Algorithms with highest reproducibility, Se and Sp were then selected for a validation step on the second set of frames. Criteria for validation were κ = 1, Se ≥ 90 %, Sp ≥ 85 %, and a calculation time < 1 second. RESULTS : Both SURF and GLCM algorithms had high operating points (Se and Sp over 90 %) and a perfect reproducibility (κ = 1). The validation step showed the GLCM detector strategy had the best diagnostic performances, with a Se of 95.79 %, a Sp of 95.19 %, and a calculation time of 0.037 seconds per frame. CONCLUSION : A computed algorithm based on a GLCM detector strategy had high diagnostic performance allowing assessment of the abundance of bubbles in SB-CE still frames. This algorithm could be of interest for clinical use (quality reporting) and for research purposes (objective comparison tool of different preparations). © Georg Thieme Verlag KG 2018-04 2018-03-29 /pmc/articles/PMC5880035/ /pubmed/29616238 http://dx.doi.org/10.1055/a-0573-1044 Text en https://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivatives License, which permits unrestricted reproduction and distribution, for non-commercial purposes only; and use and reproduction, but not distribution, of adapted material for non-commercial purposes only, provided the original work is properly cited.
spellingShingle Pietri, Olivia
Rezgui, Gada
Histace, Aymeric
Camus, Marine
Nion-Larmurier, Isabelle
Li, Cynthia
Becq, Aymeric
Abou Ali, Einas
Romain, Olivier
Chaput, Ulriikka
Marteau, Philippe
Florent, Christian
Dray, Xavier
Development and validation of an automated algorithm to evaluate the abundance of bubbles in small bowel capsule endoscopy
title Development and validation of an automated algorithm to evaluate the abundance of bubbles in small bowel capsule endoscopy
title_full Development and validation of an automated algorithm to evaluate the abundance of bubbles in small bowel capsule endoscopy
title_fullStr Development and validation of an automated algorithm to evaluate the abundance of bubbles in small bowel capsule endoscopy
title_full_unstemmed Development and validation of an automated algorithm to evaluate the abundance of bubbles in small bowel capsule endoscopy
title_short Development and validation of an automated algorithm to evaluate the abundance of bubbles in small bowel capsule endoscopy
title_sort development and validation of an automated algorithm to evaluate the abundance of bubbles in small bowel capsule endoscopy
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5880035/
https://www.ncbi.nlm.nih.gov/pubmed/29616238
http://dx.doi.org/10.1055/a-0573-1044
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