Cargando…

webpic: A flexible web application for collecting distance and count measurements from images

Despite increasing ability to store and analyze large amounts of data for organismal and ecological studies, the process of collecting distance and count measurements from images has largely remained time consuming and error-prone, particularly for tasks for which automation is difficult or impossib...

Descripción completa

Detalles Bibliográficos
Autor principal: Chang, Lucy M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5880364/
https://www.ncbi.nlm.nih.gov/pubmed/29608592
http://dx.doi.org/10.1371/journal.pone.0195184
_version_ 1783311145221750784
author Chang, Lucy M.
author_facet Chang, Lucy M.
author_sort Chang, Lucy M.
collection PubMed
description Despite increasing ability to store and analyze large amounts of data for organismal and ecological studies, the process of collecting distance and count measurements from images has largely remained time consuming and error-prone, particularly for tasks for which automation is difficult or impossible. Improving the efficiency of these tasks, which allows for more high quality data to be collected in a shorter amount of time, is therefore a high priority. The open-source web application, webpic, implements common web languages and widely available libraries and productivity apps to streamline the process of collecting distance and count measurements from images. In this paper, I introduce the framework of webpic and demonstrate one readily available feature of this application, linear measurements, using fossil leaf specimens. This application fills the gap between workflows accomplishable by individuals through existing software and those accomplishable by large, unmoderated crowds. It demonstrates that flexible web languages can be used to streamline time-intensive research tasks without the use of specialized equipment or proprietary software and highlights the potential for web resources to facilitate data collection in research tasks and outreach activities with improved efficiency.
format Online
Article
Text
id pubmed-5880364
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-58803642018-04-13 webpic: A flexible web application for collecting distance and count measurements from images Chang, Lucy M. PLoS One Research Article Despite increasing ability to store and analyze large amounts of data for organismal and ecological studies, the process of collecting distance and count measurements from images has largely remained time consuming and error-prone, particularly for tasks for which automation is difficult or impossible. Improving the efficiency of these tasks, which allows for more high quality data to be collected in a shorter amount of time, is therefore a high priority. The open-source web application, webpic, implements common web languages and widely available libraries and productivity apps to streamline the process of collecting distance and count measurements from images. In this paper, I introduce the framework of webpic and demonstrate one readily available feature of this application, linear measurements, using fossil leaf specimens. This application fills the gap between workflows accomplishable by individuals through existing software and those accomplishable by large, unmoderated crowds. It demonstrates that flexible web languages can be used to streamline time-intensive research tasks without the use of specialized equipment or proprietary software and highlights the potential for web resources to facilitate data collection in research tasks and outreach activities with improved efficiency. Public Library of Science 2018-04-02 /pmc/articles/PMC5880364/ /pubmed/29608592 http://dx.doi.org/10.1371/journal.pone.0195184 Text en © 2018 Lucy M. Chang http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Chang, Lucy M.
webpic: A flexible web application for collecting distance and count measurements from images
title webpic: A flexible web application for collecting distance and count measurements from images
title_full webpic: A flexible web application for collecting distance and count measurements from images
title_fullStr webpic: A flexible web application for collecting distance and count measurements from images
title_full_unstemmed webpic: A flexible web application for collecting distance and count measurements from images
title_short webpic: A flexible web application for collecting distance and count measurements from images
title_sort webpic: a flexible web application for collecting distance and count measurements from images
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5880364/
https://www.ncbi.nlm.nih.gov/pubmed/29608592
http://dx.doi.org/10.1371/journal.pone.0195184
work_keys_str_mv AT changlucym webpicaflexiblewebapplicationforcollectingdistanceandcountmeasurementsfromimages