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Landmark-based evaluation of a deformable motion correction for DCE-MRI of the liver
PURPOSE: Annotation of meaningful landmark ground truth on DCE-MRI is difficult and laborious. Motion correction methods applied to DCE-MRI of the liver are thus mostly evaluated using qualitative or indirect measures. We propose a novel landmark annotation scheme that facilitates the generation of...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5880871/ https://www.ncbi.nlm.nih.gov/pubmed/29473128 http://dx.doi.org/10.1007/s11548-018-1710-1 |
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author | Strehlow, Jan Spahr, Nadine Rühaak, Jan Laue, Hendrik Abolmaali, Nasreddin Preusser, Tobias Schenk, Andrea |
author_facet | Strehlow, Jan Spahr, Nadine Rühaak, Jan Laue, Hendrik Abolmaali, Nasreddin Preusser, Tobias Schenk, Andrea |
author_sort | Strehlow, Jan |
collection | PubMed |
description | PURPOSE: Annotation of meaningful landmark ground truth on DCE-MRI is difficult and laborious. Motion correction methods applied to DCE-MRI of the liver are thus mostly evaluated using qualitative or indirect measures. We propose a novel landmark annotation scheme that facilitates the generation of landmark ground truth on larger clinical datasets. METHODS: In our annotation scheme, landmarks are equally distributed over all time points of all available dataset cases and annotated by multiple observers on a per-pair basis. The scheme is used to annotate 26 DCE-MRI of the liver. A subset of the ground truth is used to optimize parameters of a deformable motion correction. Several variants of the motion correction are evaluated on the remaining cases with respect to distances of corresponding landmarks after registration, deformation field properties, and qualitative measures. RESULTS: A landmark ground truth on 26 cases could be generated in under 12 h per observer with a mean inter-observer distance below the mean voxel diagonal. Furthermore, the landmarks are spatially well distributed within the liver. Parameter optimization significantly improves the performance of the motion correction, and landmark distance after registration is 2 mm. Qualitative evaluation of the motion correction reflects the quantitative results. CONCLUSIONS: The annotation scheme makes a landmark-based evaluation of motion corrections for hepatic DCE-MRI practically feasible for larger clinical datasets. The comparably large number of cases enables both optimization and evaluation of motion correction methods. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s11548-018-1710-1) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-5880871 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Springer International Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-58808712018-04-05 Landmark-based evaluation of a deformable motion correction for DCE-MRI of the liver Strehlow, Jan Spahr, Nadine Rühaak, Jan Laue, Hendrik Abolmaali, Nasreddin Preusser, Tobias Schenk, Andrea Int J Comput Assist Radiol Surg Original Article PURPOSE: Annotation of meaningful landmark ground truth on DCE-MRI is difficult and laborious. Motion correction methods applied to DCE-MRI of the liver are thus mostly evaluated using qualitative or indirect measures. We propose a novel landmark annotation scheme that facilitates the generation of landmark ground truth on larger clinical datasets. METHODS: In our annotation scheme, landmarks are equally distributed over all time points of all available dataset cases and annotated by multiple observers on a per-pair basis. The scheme is used to annotate 26 DCE-MRI of the liver. A subset of the ground truth is used to optimize parameters of a deformable motion correction. Several variants of the motion correction are evaluated on the remaining cases with respect to distances of corresponding landmarks after registration, deformation field properties, and qualitative measures. RESULTS: A landmark ground truth on 26 cases could be generated in under 12 h per observer with a mean inter-observer distance below the mean voxel diagonal. Furthermore, the landmarks are spatially well distributed within the liver. Parameter optimization significantly improves the performance of the motion correction, and landmark distance after registration is 2 mm. Qualitative evaluation of the motion correction reflects the quantitative results. CONCLUSIONS: The annotation scheme makes a landmark-based evaluation of motion corrections for hepatic DCE-MRI practically feasible for larger clinical datasets. The comparably large number of cases enables both optimization and evaluation of motion correction methods. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s11548-018-1710-1) contains supplementary material, which is available to authorized users. Springer International Publishing 2018-02-23 2018 /pmc/articles/PMC5880871/ /pubmed/29473128 http://dx.doi.org/10.1007/s11548-018-1710-1 Text en © The Author(s) 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. |
spellingShingle | Original Article Strehlow, Jan Spahr, Nadine Rühaak, Jan Laue, Hendrik Abolmaali, Nasreddin Preusser, Tobias Schenk, Andrea Landmark-based evaluation of a deformable motion correction for DCE-MRI of the liver |
title | Landmark-based evaluation of a deformable motion correction for DCE-MRI of the liver |
title_full | Landmark-based evaluation of a deformable motion correction for DCE-MRI of the liver |
title_fullStr | Landmark-based evaluation of a deformable motion correction for DCE-MRI of the liver |
title_full_unstemmed | Landmark-based evaluation of a deformable motion correction for DCE-MRI of the liver |
title_short | Landmark-based evaluation of a deformable motion correction for DCE-MRI of the liver |
title_sort | landmark-based evaluation of a deformable motion correction for dce-mri of the liver |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5880871/ https://www.ncbi.nlm.nih.gov/pubmed/29473128 http://dx.doi.org/10.1007/s11548-018-1710-1 |
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