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Zebrafish Models of Human Disease: Gaining Insight into Human Disease at ZFIN

The Zebrafish Model Organism Database (ZFIN; https://zfin.org) is the central resource for genetic, genomic, and phenotypic data for zebrafish (Danio rerio) research. ZFIN continuously assesses trends in zebrafish research, adding new data types and providing data repositories and tools that members...

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Autores principales: Bradford, Yvonne M., Toro, Sabrina, Ramachandran, Sridhar, Ruzicka, Leyla, Howe, Douglas G., Eagle, Anne, Kalita, Patrick, Martin, Ryan, Taylor Moxon, Sierra A., Schaper, Kevin, Westerfield, Monte
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5886338/
https://www.ncbi.nlm.nih.gov/pubmed/28838067
http://dx.doi.org/10.1093/ilar/ilw040
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author Bradford, Yvonne M.
Toro, Sabrina
Ramachandran, Sridhar
Ruzicka, Leyla
Howe, Douglas G.
Eagle, Anne
Kalita, Patrick
Martin, Ryan
Taylor Moxon, Sierra A.
Schaper, Kevin
Westerfield, Monte
author_facet Bradford, Yvonne M.
Toro, Sabrina
Ramachandran, Sridhar
Ruzicka, Leyla
Howe, Douglas G.
Eagle, Anne
Kalita, Patrick
Martin, Ryan
Taylor Moxon, Sierra A.
Schaper, Kevin
Westerfield, Monte
author_sort Bradford, Yvonne M.
collection PubMed
description The Zebrafish Model Organism Database (ZFIN; https://zfin.org) is the central resource for genetic, genomic, and phenotypic data for zebrafish (Danio rerio) research. ZFIN continuously assesses trends in zebrafish research, adding new data types and providing data repositories and tools that members of the research community can use to navigate data. The many research advantages and flexibility of manipulation of zebrafish have made them an increasingly attractive animal to model and study human disease. To facilitate disease-related research, ZFIN developed support to provide human disease information as well as annotation of zebrafish models of human disease. Human disease term pages at ZFIN provide information about disease names, synonyms, and references to other databases as well as a list of publications reporting studies of human diseases in which zebrafish were used. Zebrafish orthologs of human genes that are implicated in human disease etiology are routinely studied to provide an understanding of the molecular basis of disease. Therefore, a list of human genes involved in the disease with their corresponding zebrafish ortholog is displayed on the disease page, with links to additional information regarding the genes and existing mutations. Studying human disease often requires the use of models that recapitulate some or all of the pathologies observed in human diseases. Access to information regarding existing and published models can be critical, because they provide a tractable way to gain insight into the phenotypic outcomes of the disease. ZFIN annotates zebrafish models of human disease and supports retrieval of these published models by listing zebrafish models on the disease term page as well as by providing search interfaces and data download files to access the data. The improvements ZFIN has made to annotate, display, and search data related to human disease, especially zebrafish models for disease and disease-associated gene information, should be helpful to researchers and clinicians considering the use of zebrafish to study human disease.
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spelling pubmed-58863382018-04-09 Zebrafish Models of Human Disease: Gaining Insight into Human Disease at ZFIN Bradford, Yvonne M. Toro, Sabrina Ramachandran, Sridhar Ruzicka, Leyla Howe, Douglas G. Eagle, Anne Kalita, Patrick Martin, Ryan Taylor Moxon, Sierra A. Schaper, Kevin Westerfield, Monte ILAR J Article The Zebrafish Model Organism Database (ZFIN; https://zfin.org) is the central resource for genetic, genomic, and phenotypic data for zebrafish (Danio rerio) research. ZFIN continuously assesses trends in zebrafish research, adding new data types and providing data repositories and tools that members of the research community can use to navigate data. The many research advantages and flexibility of manipulation of zebrafish have made them an increasingly attractive animal to model and study human disease. To facilitate disease-related research, ZFIN developed support to provide human disease information as well as annotation of zebrafish models of human disease. Human disease term pages at ZFIN provide information about disease names, synonyms, and references to other databases as well as a list of publications reporting studies of human diseases in which zebrafish were used. Zebrafish orthologs of human genes that are implicated in human disease etiology are routinely studied to provide an understanding of the molecular basis of disease. Therefore, a list of human genes involved in the disease with their corresponding zebrafish ortholog is displayed on the disease page, with links to additional information regarding the genes and existing mutations. Studying human disease often requires the use of models that recapitulate some or all of the pathologies observed in human diseases. Access to information regarding existing and published models can be critical, because they provide a tractable way to gain insight into the phenotypic outcomes of the disease. ZFIN annotates zebrafish models of human disease and supports retrieval of these published models by listing zebrafish models on the disease term page as well as by providing search interfaces and data download files to access the data. The improvements ZFIN has made to annotate, display, and search data related to human disease, especially zebrafish models for disease and disease-associated gene information, should be helpful to researchers and clinicians considering the use of zebrafish to study human disease. Oxford University Press 2017-07-01 2017-07-27 /pmc/articles/PMC5886338/ /pubmed/28838067 http://dx.doi.org/10.1093/ilar/ilw040 Text en © The Author 2017. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Article
Bradford, Yvonne M.
Toro, Sabrina
Ramachandran, Sridhar
Ruzicka, Leyla
Howe, Douglas G.
Eagle, Anne
Kalita, Patrick
Martin, Ryan
Taylor Moxon, Sierra A.
Schaper, Kevin
Westerfield, Monte
Zebrafish Models of Human Disease: Gaining Insight into Human Disease at ZFIN
title Zebrafish Models of Human Disease: Gaining Insight into Human Disease at ZFIN
title_full Zebrafish Models of Human Disease: Gaining Insight into Human Disease at ZFIN
title_fullStr Zebrafish Models of Human Disease: Gaining Insight into Human Disease at ZFIN
title_full_unstemmed Zebrafish Models of Human Disease: Gaining Insight into Human Disease at ZFIN
title_short Zebrafish Models of Human Disease: Gaining Insight into Human Disease at ZFIN
title_sort zebrafish models of human disease: gaining insight into human disease at zfin
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5886338/
https://www.ncbi.nlm.nih.gov/pubmed/28838067
http://dx.doi.org/10.1093/ilar/ilw040
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