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Machine learning for the structure–energy–property landscapes of molecular crystals

Molecular crystals play an important role in several fields of science and technology. They frequently crystallize in different polymorphs with substantially different physical properties. To help guide the synthesis of candidate materials, atomic-scale modelling can be used to enumerate the stable...

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Autores principales: Musil, Félix, De, Sandip, Yang, Jack, Campbell, Joshua E., Day, Graeme M., Ceriotti, Michele
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Royal Society of Chemistry 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5887104/
https://www.ncbi.nlm.nih.gov/pubmed/29675175
http://dx.doi.org/10.1039/c7sc04665k
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author Musil, Félix
De, Sandip
Yang, Jack
Campbell, Joshua E.
Day, Graeme M.
Ceriotti, Michele
author_facet Musil, Félix
De, Sandip
Yang, Jack
Campbell, Joshua E.
Day, Graeme M.
Ceriotti, Michele
author_sort Musil, Félix
collection PubMed
description Molecular crystals play an important role in several fields of science and technology. They frequently crystallize in different polymorphs with substantially different physical properties. To help guide the synthesis of candidate materials, atomic-scale modelling can be used to enumerate the stable polymorphs and to predict their properties, as well as to propose heuristic rules to rationalize the correlations between crystal structure and materials properties. Here we show how a recently-developed machine-learning (ML) framework can be used to achieve inexpensive and accurate predictions of the stability and properties of polymorphs, and a data-driven classification that is less biased and more flexible than typical heuristic rules. We discuss, as examples, the lattice energy and property landscapes of pentacene and two azapentacene isomers that are of interest as organic semiconductor materials. We show that we can estimate force field or DFT lattice energies with sub-kJ mol(–1) accuracy, using only a few hundred reference configurations, and reduce by a factor of ten the computational effort needed to predict charge mobility in the crystal structures. The automatic structural classification of the polymorphs reveals a more detailed picture of molecular packing than that provided by conventional heuristics, and helps disentangle the role of hydrogen bonded and π-stacking interactions in determining molecular self-assembly. This observation demonstrates that ML is not just a black-box scheme to interpolate between reference calculations, but can also be used as a tool to gain intuitive insights into structure–property relations in molecular crystal engineering.
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spelling pubmed-58871042018-04-19 Machine learning for the structure–energy–property landscapes of molecular crystals Musil, Félix De, Sandip Yang, Jack Campbell, Joshua E. Day, Graeme M. Ceriotti, Michele Chem Sci Chemistry Molecular crystals play an important role in several fields of science and technology. They frequently crystallize in different polymorphs with substantially different physical properties. To help guide the synthesis of candidate materials, atomic-scale modelling can be used to enumerate the stable polymorphs and to predict their properties, as well as to propose heuristic rules to rationalize the correlations between crystal structure and materials properties. Here we show how a recently-developed machine-learning (ML) framework can be used to achieve inexpensive and accurate predictions of the stability and properties of polymorphs, and a data-driven classification that is less biased and more flexible than typical heuristic rules. We discuss, as examples, the lattice energy and property landscapes of pentacene and two azapentacene isomers that are of interest as organic semiconductor materials. We show that we can estimate force field or DFT lattice energies with sub-kJ mol(–1) accuracy, using only a few hundred reference configurations, and reduce by a factor of ten the computational effort needed to predict charge mobility in the crystal structures. The automatic structural classification of the polymorphs reveals a more detailed picture of molecular packing than that provided by conventional heuristics, and helps disentangle the role of hydrogen bonded and π-stacking interactions in determining molecular self-assembly. This observation demonstrates that ML is not just a black-box scheme to interpolate between reference calculations, but can also be used as a tool to gain intuitive insights into structure–property relations in molecular crystal engineering. Royal Society of Chemistry 2017-12-12 /pmc/articles/PMC5887104/ /pubmed/29675175 http://dx.doi.org/10.1039/c7sc04665k Text en This journal is © The Royal Society of Chemistry 2018 http://creativecommons.org/licenses/by-nc/3.0/ This article is freely available. This article is licensed under a Creative Commons Attribution Non Commercial 3.0 Unported Licence (CC BY-NC 3.0)
spellingShingle Chemistry
Musil, Félix
De, Sandip
Yang, Jack
Campbell, Joshua E.
Day, Graeme M.
Ceriotti, Michele
Machine learning for the structure–energy–property landscapes of molecular crystals
title Machine learning for the structure–energy–property landscapes of molecular crystals
title_full Machine learning for the structure–energy–property landscapes of molecular crystals
title_fullStr Machine learning for the structure–energy–property landscapes of molecular crystals
title_full_unstemmed Machine learning for the structure–energy–property landscapes of molecular crystals
title_short Machine learning for the structure–energy–property landscapes of molecular crystals
title_sort machine learning for the structure–energy–property landscapes of molecular crystals
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5887104/
https://www.ncbi.nlm.nih.gov/pubmed/29675175
http://dx.doi.org/10.1039/c7sc04665k
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