Cargando…

Clostridium thermocellum LL1210 pH homeostasis mechanisms informed by transcriptomics and metabolomics

BACKGROUND: Clostridium (Ruminiclostridium) thermocellum is a model fermentative anaerobic thermophile being studied and engineered for consolidated bioprocessing of lignocellulosic feedstocks into fuels and chemicals. Engineering efforts have resulted in significant improvements in ethanol yields a...

Descripción completa

Detalles Bibliográficos
Autores principales:	Whitham, Jason M., Moon, Ji-Won, Rodriguez, Miguel, Engle, Nancy L., Klingeman, Dawn M., Rydzak, Thomas, Abel, Malaney M., Tschaplinski, Timothy J., Guss, Adam M., Brown, Steven D.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2018
Materias:	Research
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5887222/ https://www.ncbi.nlm.nih.gov/pubmed/29632556 http://dx.doi.org/10.1186/s13068-018-1095-y

Ejemplares similares

Pentose sugars inhibit metabolism and increase expression of an AgrD-type cyclic pentapeptide in Clostridium thermocellum
por: Verbeke, Tobin J., et al.
Publicado: (2017)

Corrigendum: Pentose sugars inhibit metabolism and increase expression of an AgrD-type cyclic pentapeptide in Clostridium thermocellum
por: Verbeke, Tobin J., et al.
Publicado: (2017)

Elimination of formate production in Clostridium thermocellum
por: Rydzak, Thomas, et al.
Publicado: (2015)

Clostridium thermocellum DSM 1313 transcriptional responses to redox perturbation
por: Sander, Kyle, et al.
Publicado: (2015)

Improved growth rate in Clostridium thermocellum hydrogenase mutant via perturbed sulfur metabolism
por: Biswas, Ranjita, et al.
Publicado: (2017)

Clostridium thermocellum ATCC27405 transcriptomic, metabolomic and proteomic profiles after ethanol stress
por: Yang, Shihui, et al.
Publicado: (2012)

Targeted redox and energy cofactor metabolomics in Clostridium thermocellum and Thermoanaerobacterium saccharolyticum
por: Sander, Kyle, et al.
Publicado: (2017)

Simultaneous achievement of high ethanol yield and titer in Clostridium thermocellum
por: Tian, Liang, et al.
Publicado: (2016)

The exometabolome of Clostridium thermocellum reveals overflow metabolism at high cellulose loading
por: Holwerda, Evert K, et al.
Publicado: (2014)

The Roles of Nicotinamide Adenine Dinucleotide Phosphate Reoxidation and Ammonium Assimilation in the Secretion of Amino Acids as Byproducts of Clostridium thermocellum
por: Yayo, Johannes, et al.
Publicado: (2023)

Dcm methylation is detrimental to plasmid transformation in Clostridium thermocellum
por: Guss, Adam M, et al.
Publicado: (2012)

Specialized activities and expression differences for Clostridium thermocellum biofilm and planktonic cells
por: Dumitrache, Alexandru, et al.
Publicado: (2017)

Industrial Robustness: Understanding the Mechanism of Tolerance for the Populus Hydrolysate-Tolerant Mutant Strain of Clostridium thermocellum
por: Linville, Jessica L., et al.
Publicado: (2013)

Application of Long Sequence Reads To Improve Genomes for Clostridium thermocellum AD2, Clostridium thermocellum LQRI, and Pelosinus fermentans R7
por: Utturkar, Sagar M., et al.
Publicado: (2016)

Global transcriptome analysis of Clostridium thermocellum ATCC 27405 during growth on dilute acid pretreated Populus and switchgrass
por: Wilson, Charlotte M, et al.
Publicado: (2013)

The LacI family protein GlyR3 co-regulates the celC operon and manB in Clostridium thermocellum
por: Choi, Jinlyung, et al.
Publicado: (2017)

Enhanced ethanol formation by Clostridium thermocellum via pyruvate decarboxylase
por: Tian, Liang, et al.
Publicado: (2017)

Analysis of strand-specific RNA-seq data using machine learning reveals the structures of transcription units in Clostridium thermocellum
por: Chou, Wen-Chi, et al.
Publicado: (2015)

Consolidated bioprocessing of Populus using Clostridium (Ruminiclostridium) thermocellum: a case study on the impact of lignin composition and structure
por: Dumitrache, Alexandru, et al.
Publicado: (2016)

Increase in Ethanol Yield via Elimination of Lactate Production in an Ethanol-Tolerant Mutant of Clostridium thermocellum
por: Biswas, Ranjita, et al.
Publicado: (2014)

Metabolome Analysis of Constituents in Membrane Vesicles for Clostridium thermocellum Growth Stimulation
por: Ichikawa, Shunsuke, et al.
Publicado: (2021)

Dramatic performance of Clostridium thermocellum explained by its wide range of cellulase modalities
por: Xu, Qi, et al.
Publicado: (2016)

Tracking the cellulolytic activity of Clostridium thermocellum biofilms
por: Dumitrache, Alexandru, et al.
Publicado: (2013)

Integrated omics analyses reveal the details of metabolic adaptation of Clostridium thermocellum to lignocellulose-derived growth inhibitors released during the deconstruction of switchgrass
por: Poudel, Suresh, et al.
Publicado: (2017)

Role of Pectinolytic Enzymes Identified in Clostridium thermocellum Cellulosome
por: Chakraborty, Soumyadeep, et al.
Publicado: (2015)

Elimination of hydrogenase active site assembly blocks H(2) production and increases ethanol yield in Clostridium thermocellum
por: Biswas, Ranjita, et al.
Publicado: (2015)

Functional heterologous expression of an engineered full length CipA from Clostridium thermocellum in Thermoanaerobacterium saccharolyticum
por: Currie, Devin H, et al.
Publicado: (2013)

Metabolic Adaption of Ethanol-Tolerant Clostridium thermocellum
por: Zhu, Xinshu, et al.
Publicado: (2013)

Identifying promoters for gene expression in Clostridium thermocellum
por: Olson, Daniel G., et al.
Publicado: (2015)

Deciphering Cellodextrin and Glucose Uptake in Clostridium thermocellum
por: Yan, Fei, et al.
Publicado: (2022)

Ethanol tolerance in engineered strains of Clostridium thermocellum
por: Olson, Daniel G., et al.
Publicado: (2023)

Rational development of transformation in Clostridium thermocellum ATCC 27405 via complete methylome analysis and evasion of native restriction–modification systems
por: Riley, Lauren A., et al.
Publicado: (2019)

Genome-scale metabolic analysis of Clostridium thermocellum for bioethanol production
por: Roberts, Seth B, et al.
Publicado: (2010)

Identification and characterization of proteins of unknown function (PUFs) in Clostridium thermocellum DSM 1313 strains as potential genetic engineering targets
por: Poudel, Suresh, et al.
Publicado: (2021)

Relationships between Sphaerulina musiva Infection and the Populus Microbiome and Metabolome
por: Dove, Nicholas C., et al.
Publicado: (2022)

Clostridium thermocellum transcriptomic profiles after exposure to furfural or heat stress
por: Wilson, Charlotte M, et al.
Publicado: (2013)

Promiscuous plasmid replication in thermophiles: Use of a novel hyperthermophilic replicon for genetic manipulation of Clostridium thermocellum at its optimum growth temperature
por: Groom, Joseph, et al.
Publicado: (2016)

Genetic engineering of Clostridium thermocellum DSM1313 for enhanced ethanol production
por: Kannuchamy, Saranyah, et al.
Publicado: (2016)

The effect of switchgrass loadings on feedstock solubilization and biofuel production by Clostridium thermocellum
por: Verbeke, Tobin J., et al.
Publicado: (2017)

Metabolic engineering of Clostridium thermocellum for n-butanol production from cellulose
por: Tian, Liang, et al.
Publicado: (2019)

Cannot write session to /tmp/vufind_sessions/sess_en9qnvkbfl0u51pgfcbndljucu