Cargando…
Assessing the stability of free-energy perturbation calculations by performing variations in the method
We have calculated relative binding affinities for eight tetrafluorophenyl-triazole-thiogalactoside inhibitors of galectin-3 with the alchemical free-energy perturbation approach. We obtain a mean absolute deviation from experimental estimates of only 2–3 kJ/mol and a correlation coefficient (R(2))...
Autores principales: | Manzoni, Francesco, Ryde, Ulf |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5889414/ https://www.ncbi.nlm.nih.gov/pubmed/29536221 http://dx.doi.org/10.1007/s10822-018-0110-5 |
Ejemplares similares
-
Converging ligand‐binding free energies obtained with free‐energy perturbations at the quantum mechanical level
por: Olsson, Martin A., et al.
Publicado: (2016) -
Binding affinities of the farnesoid X receptor in the D3R Grand Challenge 2 estimated by free-energy perturbation and docking
por: Olsson, Martin A., et al.
Publicado: (2017) -
Use of multistate Bennett acceptance ratio method for free-energy calculations from enhanced sampling and free-energy perturbation
por: Matsunaga, Yasuhiro, et al.
Publicado: (2022) -
Binding free energies in the SAMPL5 octa-acid host–guest challenge calculated with DFT-D3 and CCSD(T)
por: Caldararu, Octav, et al.
Publicado: (2016) -
Large-scale application of free energy perturbation calculations for antibody design
por: Zhu, Fangqiang, et al.
Publicado: (2022)