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Resolving the Lophiostoma bipolare complex: Generic delimitations within Lophiostomataceae

Lophiostoma bipolare was taxonomically revised based on the morphological observations and phylogenetic analyses of molecular data from nuclear rDNA SSU-ITS-LSU, TUB, tef1, and rpb2 genes. Twenty-nine strains were morphologically similar to Lo. bipolare. A total of 174 sequences were generated from...

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Autores principales: Hashimoto, A., Hirayama, K., Takahashi, H., Matsumura, M., Okada, G., Chen, C.Y., Huang, J.W., Kakishima, M., Ono, T., Tanaka, K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: CBS Fungal Biodiversity Centre 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5889712/
https://www.ncbi.nlm.nih.gov/pubmed/29632417
http://dx.doi.org/10.1016/j.simyco.2018.03.001
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author Hashimoto, A.
Hirayama, K.
Takahashi, H.
Matsumura, M.
Okada, G.
Chen, C.Y.
Huang, J.W.
Kakishima, M.
Ono, T.
Tanaka, K.
author_facet Hashimoto, A.
Hirayama, K.
Takahashi, H.
Matsumura, M.
Okada, G.
Chen, C.Y.
Huang, J.W.
Kakishima, M.
Ono, T.
Tanaka, K.
author_sort Hashimoto, A.
collection PubMed
description Lophiostoma bipolare was taxonomically revised based on the morphological observations and phylogenetic analyses of molecular data from nuclear rDNA SSU-ITS-LSU, TUB, tef1, and rpb2 genes. Twenty-nine strains were morphologically similar to Lo. bipolare. A total of 174 sequences were generated from the Lo. bipolare complex. Phylogenetic analyses based on TUB sequence revealed 11 distinct species within the Lo. bipolare complex. Morphological features of the ascospores and the anatomical structure of the ascomata from both field collections as well as axenic culture, which have been reported previously as variable features at intraspecific levels, were compared to evaluate the taxonomic reliability of these features. To clarify the generic position of the 11 species, phylogenetic analyses were done on SSU-ITS-LSU-tef1-rpb2 gene sequences. The Lo. bipolare complex shared phylogenetic relationships with Pseudolophiostoma and Vaginatispora, and formed an additional five distinct clades from other members of Lophiostomataceae. According to its phylogenetic position, Lo. bipolare sensu stricto was distantly related to Lophiostoma s. str., and formed an independent clade within Lophiostomataceae. Lophiostoma bipolare s. str. could be distinguished from the other lophiostomataceous genera by the clypeus around the ostiolar neck and by the thin and uniformly thick peridium. A novel genus described as Lentistoma was established to accommodate this species, and the epitypification of Lentistoma bipolare (basionym: Massarina bipolaris) was proposed. Other lineages of the Lo. bipolare complex could not be separated on the basis of the ascospore size and sheath variations, but were distinguished based on ascomatal features, such as the existence of the clypeus, brown hyphae surrounding the peridium, and the contexture of the peridium, which were stable indicators of generic boundaries in Lophiostomataceae. Four additional new genera with five new species were recognised based on these morphological differences: Crassiclypeus (C. aquaticus), Flabellascoma (F. cycadicola and F. minimum), Leptoparies (Lep. palmarum), and Pseudopaucispora (Pseudop. brunneospora). Three new species were added to Pseudolophiostoma (Pseudol. cornisporum, Pseudol. obtusisporum, and Pseudol. tropicum) and two new species were added to Vaginatispora (V. amygdali and V. scabrispora). The re-evaluation of the validity of several previously recognised genera resulted in the introduction of two new genera with new combinations for Lophiostoma pseudoarmatisporum as Parapaucispora pseudoarmatispora and Vaginatispora fuckelii as Neovaginatispora fuckelii.
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spelling pubmed-58897122018-04-09 Resolving the Lophiostoma bipolare complex: Generic delimitations within Lophiostomataceae Hashimoto, A. Hirayama, K. Takahashi, H. Matsumura, M. Okada, G. Chen, C.Y. Huang, J.W. Kakishima, M. Ono, T. Tanaka, K. Stud Mycol Research Paper Lophiostoma bipolare was taxonomically revised based on the morphological observations and phylogenetic analyses of molecular data from nuclear rDNA SSU-ITS-LSU, TUB, tef1, and rpb2 genes. Twenty-nine strains were morphologically similar to Lo. bipolare. A total of 174 sequences were generated from the Lo. bipolare complex. Phylogenetic analyses based on TUB sequence revealed 11 distinct species within the Lo. bipolare complex. Morphological features of the ascospores and the anatomical structure of the ascomata from both field collections as well as axenic culture, which have been reported previously as variable features at intraspecific levels, were compared to evaluate the taxonomic reliability of these features. To clarify the generic position of the 11 species, phylogenetic analyses were done on SSU-ITS-LSU-tef1-rpb2 gene sequences. The Lo. bipolare complex shared phylogenetic relationships with Pseudolophiostoma and Vaginatispora, and formed an additional five distinct clades from other members of Lophiostomataceae. According to its phylogenetic position, Lo. bipolare sensu stricto was distantly related to Lophiostoma s. str., and formed an independent clade within Lophiostomataceae. Lophiostoma bipolare s. str. could be distinguished from the other lophiostomataceous genera by the clypeus around the ostiolar neck and by the thin and uniformly thick peridium. A novel genus described as Lentistoma was established to accommodate this species, and the epitypification of Lentistoma bipolare (basionym: Massarina bipolaris) was proposed. Other lineages of the Lo. bipolare complex could not be separated on the basis of the ascospore size and sheath variations, but were distinguished based on ascomatal features, such as the existence of the clypeus, brown hyphae surrounding the peridium, and the contexture of the peridium, which were stable indicators of generic boundaries in Lophiostomataceae. Four additional new genera with five new species were recognised based on these morphological differences: Crassiclypeus (C. aquaticus), Flabellascoma (F. cycadicola and F. minimum), Leptoparies (Lep. palmarum), and Pseudopaucispora (Pseudop. brunneospora). Three new species were added to Pseudolophiostoma (Pseudol. cornisporum, Pseudol. obtusisporum, and Pseudol. tropicum) and two new species were added to Vaginatispora (V. amygdali and V. scabrispora). The re-evaluation of the validity of several previously recognised genera resulted in the introduction of two new genera with new combinations for Lophiostoma pseudoarmatisporum as Parapaucispora pseudoarmatispora and Vaginatispora fuckelii as Neovaginatispora fuckelii. CBS Fungal Biodiversity Centre 2018-06 2018-03-07 /pmc/articles/PMC5889712/ /pubmed/29632417 http://dx.doi.org/10.1016/j.simyco.2018.03.001 Text en © 2018 Westerdijk Fungal Biodiversity Institute. Production and hosting by ELSEVIER B.V. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Research Paper
Hashimoto, A.
Hirayama, K.
Takahashi, H.
Matsumura, M.
Okada, G.
Chen, C.Y.
Huang, J.W.
Kakishima, M.
Ono, T.
Tanaka, K.
Resolving the Lophiostoma bipolare complex: Generic delimitations within Lophiostomataceae
title Resolving the Lophiostoma bipolare complex: Generic delimitations within Lophiostomataceae
title_full Resolving the Lophiostoma bipolare complex: Generic delimitations within Lophiostomataceae
title_fullStr Resolving the Lophiostoma bipolare complex: Generic delimitations within Lophiostomataceae
title_full_unstemmed Resolving the Lophiostoma bipolare complex: Generic delimitations within Lophiostomataceae
title_short Resolving the Lophiostoma bipolare complex: Generic delimitations within Lophiostomataceae
title_sort resolving the lophiostoma bipolare complex: generic delimitations within lophiostomataceae
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5889712/
https://www.ncbi.nlm.nih.gov/pubmed/29632417
http://dx.doi.org/10.1016/j.simyco.2018.03.001
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