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A novel single nucleotide polymorphism in exon 3 of MYOC enhances the risk of glaucoma
Genetic polymorphismsof MYOCalter the myocilin protein,which leads to disruption of thenormal regulation of intraocular pressure (IOP) that ultimately causes glaucoma.Theaim of the present study was to identify the polymorphism in exon 3 of the MYOC gene of theglaucoma patients in Lahore, Pakistan....
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5890997/ https://www.ncbi.nlm.nih.gov/pubmed/29630620 http://dx.doi.org/10.1371/journal.pone.0195157 |
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author | Nazir, Sabeen Mukhtar, Maryam Shahnawaz, Maryam Farooqi, Shaima Fatima, Naz Mehmood, Rabia Sheikh, Nadeem |
author_facet | Nazir, Sabeen Mukhtar, Maryam Shahnawaz, Maryam Farooqi, Shaima Fatima, Naz Mehmood, Rabia Sheikh, Nadeem |
author_sort | Nazir, Sabeen |
collection | PubMed |
description | Genetic polymorphismsof MYOCalter the myocilin protein,which leads to disruption of thenormal regulation of intraocular pressure (IOP) that ultimately causes glaucoma.Theaim of the present study was to identify the polymorphism in exon 3 of the MYOC gene of theglaucoma patients in Lahore, Pakistan. We conducted a case-control study with 100 patients and 100 controls subjects. We extracted DNA from blood samples,amplified the target DNA fragmentby PCR, and identifiedpolymorphisms through sequencing. We observed that the allelic and genotypic frequencies of rs74315341 and rs879255525 were associated with glaucoma in our patient population. The polymorphism atrs74315341 led to the substitutionof serine for arginine,whereas the polymorphism at rs879255525 led to the substitution ofasparagine for lysine. The haplotype TGAAGCCATTTC was associated with disease onset, whereas the haplotype GGAAGCCATTTC was protective against disease development. In conclusion, weidentified MYOC gene polymorphisms in susceptible regions that were associated withglaucoma onset among the Lahore patient population.This is the first report to identify a novel mutation in rs879255525 in exon 3 of the MYOC genethat is associated withglaucoma. |
format | Online Article Text |
id | pubmed-5890997 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-58909972018-04-20 A novel single nucleotide polymorphism in exon 3 of MYOC enhances the risk of glaucoma Nazir, Sabeen Mukhtar, Maryam Shahnawaz, Maryam Farooqi, Shaima Fatima, Naz Mehmood, Rabia Sheikh, Nadeem PLoS One Research Article Genetic polymorphismsof MYOCalter the myocilin protein,which leads to disruption of thenormal regulation of intraocular pressure (IOP) that ultimately causes glaucoma.Theaim of the present study was to identify the polymorphism in exon 3 of the MYOC gene of theglaucoma patients in Lahore, Pakistan. We conducted a case-control study with 100 patients and 100 controls subjects. We extracted DNA from blood samples,amplified the target DNA fragmentby PCR, and identifiedpolymorphisms through sequencing. We observed that the allelic and genotypic frequencies of rs74315341 and rs879255525 were associated with glaucoma in our patient population. The polymorphism atrs74315341 led to the substitutionof serine for arginine,whereas the polymorphism at rs879255525 led to the substitution ofasparagine for lysine. The haplotype TGAAGCCATTTC was associated with disease onset, whereas the haplotype GGAAGCCATTTC was protective against disease development. In conclusion, weidentified MYOC gene polymorphisms in susceptible regions that were associated withglaucoma onset among the Lahore patient population.This is the first report to identify a novel mutation in rs879255525 in exon 3 of the MYOC genethat is associated withglaucoma. Public Library of Science 2018-04-09 /pmc/articles/PMC5890997/ /pubmed/29630620 http://dx.doi.org/10.1371/journal.pone.0195157 Text en © 2018 Nazir et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Nazir, Sabeen Mukhtar, Maryam Shahnawaz, Maryam Farooqi, Shaima Fatima, Naz Mehmood, Rabia Sheikh, Nadeem A novel single nucleotide polymorphism in exon 3 of MYOC enhances the risk of glaucoma |
title | A novel single nucleotide polymorphism in exon 3 of MYOC enhances the risk of glaucoma |
title_full | A novel single nucleotide polymorphism in exon 3 of MYOC enhances the risk of glaucoma |
title_fullStr | A novel single nucleotide polymorphism in exon 3 of MYOC enhances the risk of glaucoma |
title_full_unstemmed | A novel single nucleotide polymorphism in exon 3 of MYOC enhances the risk of glaucoma |
title_short | A novel single nucleotide polymorphism in exon 3 of MYOC enhances the risk of glaucoma |
title_sort | novel single nucleotide polymorphism in exon 3 of myoc enhances the risk of glaucoma |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5890997/ https://www.ncbi.nlm.nih.gov/pubmed/29630620 http://dx.doi.org/10.1371/journal.pone.0195157 |
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