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A novel single nucleotide polymorphism in exon 3 of MYOC enhances the risk of glaucoma

Genetic polymorphismsof MYOCalter the myocilin protein,which leads to disruption of thenormal regulation of intraocular pressure (IOP) that ultimately causes glaucoma.Theaim of the present study was to identify the polymorphism in exon 3 of the MYOC gene of theglaucoma patients in Lahore, Pakistan....

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Autores principales: Nazir, Sabeen, Mukhtar, Maryam, Shahnawaz, Maryam, Farooqi, Shaima, Fatima, Naz, Mehmood, Rabia, Sheikh, Nadeem
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5890997/
https://www.ncbi.nlm.nih.gov/pubmed/29630620
http://dx.doi.org/10.1371/journal.pone.0195157
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author Nazir, Sabeen
Mukhtar, Maryam
Shahnawaz, Maryam
Farooqi, Shaima
Fatima, Naz
Mehmood, Rabia
Sheikh, Nadeem
author_facet Nazir, Sabeen
Mukhtar, Maryam
Shahnawaz, Maryam
Farooqi, Shaima
Fatima, Naz
Mehmood, Rabia
Sheikh, Nadeem
author_sort Nazir, Sabeen
collection PubMed
description Genetic polymorphismsof MYOCalter the myocilin protein,which leads to disruption of thenormal regulation of intraocular pressure (IOP) that ultimately causes glaucoma.Theaim of the present study was to identify the polymorphism in exon 3 of the MYOC gene of theglaucoma patients in Lahore, Pakistan. We conducted a case-control study with 100 patients and 100 controls subjects. We extracted DNA from blood samples,amplified the target DNA fragmentby PCR, and identifiedpolymorphisms through sequencing. We observed that the allelic and genotypic frequencies of rs74315341 and rs879255525 were associated with glaucoma in our patient population. The polymorphism atrs74315341 led to the substitutionof serine for arginine,whereas the polymorphism at rs879255525 led to the substitution ofasparagine for lysine. The haplotype TGAAGCCATTTC was associated with disease onset, whereas the haplotype GGAAGCCATTTC was protective against disease development. In conclusion, weidentified MYOC gene polymorphisms in susceptible regions that were associated withglaucoma onset among the Lahore patient population.This is the first report to identify a novel mutation in rs879255525 in exon 3 of the MYOC genethat is associated withglaucoma.
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spelling pubmed-58909972018-04-20 A novel single nucleotide polymorphism in exon 3 of MYOC enhances the risk of glaucoma Nazir, Sabeen Mukhtar, Maryam Shahnawaz, Maryam Farooqi, Shaima Fatima, Naz Mehmood, Rabia Sheikh, Nadeem PLoS One Research Article Genetic polymorphismsof MYOCalter the myocilin protein,which leads to disruption of thenormal regulation of intraocular pressure (IOP) that ultimately causes glaucoma.Theaim of the present study was to identify the polymorphism in exon 3 of the MYOC gene of theglaucoma patients in Lahore, Pakistan. We conducted a case-control study with 100 patients and 100 controls subjects. We extracted DNA from blood samples,amplified the target DNA fragmentby PCR, and identifiedpolymorphisms through sequencing. We observed that the allelic and genotypic frequencies of rs74315341 and rs879255525 were associated with glaucoma in our patient population. The polymorphism atrs74315341 led to the substitutionof serine for arginine,whereas the polymorphism at rs879255525 led to the substitution ofasparagine for lysine. The haplotype TGAAGCCATTTC was associated with disease onset, whereas the haplotype GGAAGCCATTTC was protective against disease development. In conclusion, weidentified MYOC gene polymorphisms in susceptible regions that were associated withglaucoma onset among the Lahore patient population.This is the first report to identify a novel mutation in rs879255525 in exon 3 of the MYOC genethat is associated withglaucoma. Public Library of Science 2018-04-09 /pmc/articles/PMC5890997/ /pubmed/29630620 http://dx.doi.org/10.1371/journal.pone.0195157 Text en © 2018 Nazir et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Nazir, Sabeen
Mukhtar, Maryam
Shahnawaz, Maryam
Farooqi, Shaima
Fatima, Naz
Mehmood, Rabia
Sheikh, Nadeem
A novel single nucleotide polymorphism in exon 3 of MYOC enhances the risk of glaucoma
title A novel single nucleotide polymorphism in exon 3 of MYOC enhances the risk of glaucoma
title_full A novel single nucleotide polymorphism in exon 3 of MYOC enhances the risk of glaucoma
title_fullStr A novel single nucleotide polymorphism in exon 3 of MYOC enhances the risk of glaucoma
title_full_unstemmed A novel single nucleotide polymorphism in exon 3 of MYOC enhances the risk of glaucoma
title_short A novel single nucleotide polymorphism in exon 3 of MYOC enhances the risk of glaucoma
title_sort novel single nucleotide polymorphism in exon 3 of myoc enhances the risk of glaucoma
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5890997/
https://www.ncbi.nlm.nih.gov/pubmed/29630620
http://dx.doi.org/10.1371/journal.pone.0195157
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