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Depth-Resolved Distribution of Particle-Attached and Free-Living Bacterial Communities in the Water Column of the New Britain Trench

Particle-attached (PA) and free-living (FL) microorganisms play significant but different roles in mineralization of organic matter (OM) in the ocean. Currently, little is known about PA and FL microbial communities in bathyal and abyssal pelagic waters, and understanding of their diversity and dist...

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Autores principales: Liu, Rulong, Wang, Li, Liu, Qianfeng, Wang, Zixuan, Li, Zhenzhen, Fang, Jiasong, Zhang, Li, Luo, Min
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5893722/
https://www.ncbi.nlm.nih.gov/pubmed/29670597
http://dx.doi.org/10.3389/fmicb.2018.00625
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author Liu, Rulong
Wang, Li
Liu, Qianfeng
Wang, Zixuan
Li, Zhenzhen
Fang, Jiasong
Zhang, Li
Luo, Min
author_facet Liu, Rulong
Wang, Li
Liu, Qianfeng
Wang, Zixuan
Li, Zhenzhen
Fang, Jiasong
Zhang, Li
Luo, Min
author_sort Liu, Rulong
collection PubMed
description Particle-attached (PA) and free-living (FL) microorganisms play significant but different roles in mineralization of organic matter (OM) in the ocean. Currently, little is known about PA and FL microbial communities in bathyal and abyssal pelagic waters, and understanding of their diversity and distribution in the water column and their interactions with environmental factors in the trench area is limited. We investigated for the first time the variations of abundance and diversities of the PA and FL bacterial communities in the epi-, bathy-, and abyssopelagic zones of the New Britain Trench (NBT). The PA communities showed decreasing species richness but increasing relative abundance with depth, suggesting the increasing ecological significance of the PA bacteria in the deep ocean. The abundance and diversity of PA and FL bacterial communities in the NBT water column appeared to be shaped by different sets of environment factors, which might be related to different micro-niches of the two communities. Analysis on species distribution suggested that the differences between PA and FL bacteria communities mainly resulted from the different relative abundance of the “shared taxa” in the two types of communities. These findings provide valuable information for understanding the relative ecological roles of the PA and FL bacterial communities and their interactions with environmental factors in different pelagic zones along the vertical profile of the NBT water column.
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spelling pubmed-58937222018-04-18 Depth-Resolved Distribution of Particle-Attached and Free-Living Bacterial Communities in the Water Column of the New Britain Trench Liu, Rulong Wang, Li Liu, Qianfeng Wang, Zixuan Li, Zhenzhen Fang, Jiasong Zhang, Li Luo, Min Front Microbiol Microbiology Particle-attached (PA) and free-living (FL) microorganisms play significant but different roles in mineralization of organic matter (OM) in the ocean. Currently, little is known about PA and FL microbial communities in bathyal and abyssal pelagic waters, and understanding of their diversity and distribution in the water column and their interactions with environmental factors in the trench area is limited. We investigated for the first time the variations of abundance and diversities of the PA and FL bacterial communities in the epi-, bathy-, and abyssopelagic zones of the New Britain Trench (NBT). The PA communities showed decreasing species richness but increasing relative abundance with depth, suggesting the increasing ecological significance of the PA bacteria in the deep ocean. The abundance and diversity of PA and FL bacterial communities in the NBT water column appeared to be shaped by different sets of environment factors, which might be related to different micro-niches of the two communities. Analysis on species distribution suggested that the differences between PA and FL bacteria communities mainly resulted from the different relative abundance of the “shared taxa” in the two types of communities. These findings provide valuable information for understanding the relative ecological roles of the PA and FL bacterial communities and their interactions with environmental factors in different pelagic zones along the vertical profile of the NBT water column. Frontiers Media S.A. 2018-04-04 /pmc/articles/PMC5893722/ /pubmed/29670597 http://dx.doi.org/10.3389/fmicb.2018.00625 Text en Copyright © 2018 Liu, Wang, Liu, Wang, Li, Fang, Zhang and Luo. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Liu, Rulong
Wang, Li
Liu, Qianfeng
Wang, Zixuan
Li, Zhenzhen
Fang, Jiasong
Zhang, Li
Luo, Min
Depth-Resolved Distribution of Particle-Attached and Free-Living Bacterial Communities in the Water Column of the New Britain Trench
title Depth-Resolved Distribution of Particle-Attached and Free-Living Bacterial Communities in the Water Column of the New Britain Trench
title_full Depth-Resolved Distribution of Particle-Attached and Free-Living Bacterial Communities in the Water Column of the New Britain Trench
title_fullStr Depth-Resolved Distribution of Particle-Attached and Free-Living Bacterial Communities in the Water Column of the New Britain Trench
title_full_unstemmed Depth-Resolved Distribution of Particle-Attached and Free-Living Bacterial Communities in the Water Column of the New Britain Trench
title_short Depth-Resolved Distribution of Particle-Attached and Free-Living Bacterial Communities in the Water Column of the New Britain Trench
title_sort depth-resolved distribution of particle-attached and free-living bacterial communities in the water column of the new britain trench
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5893722/
https://www.ncbi.nlm.nih.gov/pubmed/29670597
http://dx.doi.org/10.3389/fmicb.2018.00625
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