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Integrative Bioinformatics Approaches for Identification of Drug Targets in Hypertension

High blood pressure or hypertension is an established risk factor for a myriad of cardiovascular diseases. Genome-wide association studies have successfully found over nine hundred loci that contribute to blood pressure. However, the mechanisms through which these loci contribute to disease are stil...

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Autores principales: Hemerich, Daiane, van Setten, Jessica, Tragante, Vinicius, Asselbergs, Folkert W.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5894467/
https://www.ncbi.nlm.nih.gov/pubmed/29670885
http://dx.doi.org/10.3389/fcvm.2018.00025
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author Hemerich, Daiane
van Setten, Jessica
Tragante, Vinicius
Asselbergs, Folkert W.
author_facet Hemerich, Daiane
van Setten, Jessica
Tragante, Vinicius
Asselbergs, Folkert W.
author_sort Hemerich, Daiane
collection PubMed
description High blood pressure or hypertension is an established risk factor for a myriad of cardiovascular diseases. Genome-wide association studies have successfully found over nine hundred loci that contribute to blood pressure. However, the mechanisms through which these loci contribute to disease are still relatively undetermined as less than 10% of hypertension-associated variants are located in coding regions. Phenotypic cell-type specificity analyses and expression quantitative trait loci show predominant vascular and cardiac tissue involvement for blood pressure-associated variants. Maps of chromosomal conformation and expression quantitative trait loci (eQTL) in critical tissues identified 2,424 genes interacting with blood pressure-associated loci, of which 517 are druggable. Integrating genome, regulome and transcriptome information in relevant cell-types could help to functionally annotate blood pressure associated loci and identify drug targets.
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spelling pubmed-58944672018-04-18 Integrative Bioinformatics Approaches for Identification of Drug Targets in Hypertension Hemerich, Daiane van Setten, Jessica Tragante, Vinicius Asselbergs, Folkert W. Front Cardiovasc Med Cardiovascular Medicine High blood pressure or hypertension is an established risk factor for a myriad of cardiovascular diseases. Genome-wide association studies have successfully found over nine hundred loci that contribute to blood pressure. However, the mechanisms through which these loci contribute to disease are still relatively undetermined as less than 10% of hypertension-associated variants are located in coding regions. Phenotypic cell-type specificity analyses and expression quantitative trait loci show predominant vascular and cardiac tissue involvement for blood pressure-associated variants. Maps of chromosomal conformation and expression quantitative trait loci (eQTL) in critical tissues identified 2,424 genes interacting with blood pressure-associated loci, of which 517 are druggable. Integrating genome, regulome and transcriptome information in relevant cell-types could help to functionally annotate blood pressure associated loci and identify drug targets. Frontiers Media S.A. 2018-04-04 /pmc/articles/PMC5894467/ /pubmed/29670885 http://dx.doi.org/10.3389/fcvm.2018.00025 Text en Copyright © 2018 Hemerich, van Setten, Tragante and Asselbergs http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Cardiovascular Medicine
Hemerich, Daiane
van Setten, Jessica
Tragante, Vinicius
Asselbergs, Folkert W.
Integrative Bioinformatics Approaches for Identification of Drug Targets in Hypertension
title Integrative Bioinformatics Approaches for Identification of Drug Targets in Hypertension
title_full Integrative Bioinformatics Approaches for Identification of Drug Targets in Hypertension
title_fullStr Integrative Bioinformatics Approaches for Identification of Drug Targets in Hypertension
title_full_unstemmed Integrative Bioinformatics Approaches for Identification of Drug Targets in Hypertension
title_short Integrative Bioinformatics Approaches for Identification of Drug Targets in Hypertension
title_sort integrative bioinformatics approaches for identification of drug targets in hypertension
topic Cardiovascular Medicine
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5894467/
https://www.ncbi.nlm.nih.gov/pubmed/29670885
http://dx.doi.org/10.3389/fcvm.2018.00025
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