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Karyotype diversity and 2C DNA content in species of the Caesalpinia group
BACKGROUND: The Leguminosae family is the third-largest family of angiosperms, and Caesalpinioideae is its second-largest subfamily. A great number of species (approximately 205) are found in the Caesalpinia group within this subfamily; together with these species’ phenotypic plasticity and the simi...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5896153/ https://www.ncbi.nlm.nih.gov/pubmed/29642872 http://dx.doi.org/10.1186/s12863-018-0610-2 |
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author | Rodrigues, Polliana Silva Souza, Margarete Magalhães Melo, Cláusio Antônio Ferreira Pereira, Telma Nair Santana Corrêa, Ronan Xavier |
author_facet | Rodrigues, Polliana Silva Souza, Margarete Magalhães Melo, Cláusio Antônio Ferreira Pereira, Telma Nair Santana Corrêa, Ronan Xavier |
author_sort | Rodrigues, Polliana Silva |
collection | PubMed |
description | BACKGROUND: The Leguminosae family is the third-largest family of angiosperms, and Caesalpinioideae is its second-largest subfamily. A great number of species (approximately 205) are found in the Caesalpinia group within this subfamily; together with these species’ phenotypic plasticity and the similarities in their morphological descriptors, make this a complex group for taxonomic and phylogenetic studies. The objective of the present work was to evaluate the karyotypic diversity and the 2C DNA content variation in 10 species of the Caesalpinia group, representing six genera: Paubrasilia, Caesalpinia, Cenostigma, Poincianella, Erythrostemon and Libidibia. The GC-rich heterochromatin and 45S rDNA sites (which are used as chromosome markers) were located to evaluate the karyotype diversity in the clade. The variation in the 2C DNA content was determined through flow cytometry. RESULTS: The fluorochrome banding indicated that the chromomycin A(3)(+)/4′,6-diamidino-2-phenylindole(−) blocks were exclusively in the terminal regions of the chromosomes, coinciding with 45S rDNA sites in all analyzed species. Physical mapping of the species (through fluorescence in situ hybridization) revealed variation in the size of the hybridization signals and in the number and distribution of the 45S rDNA sites. All hybridization sites were in the terminal regions of the chromosomes. In addition, all species had a hybridization site in the fourth chromosome pair. The 2C DNA content ranged from 1.54 pg in Erythrostemon calycina to 2.82 pg in the Paubrasilia echinata large-leaf variant. The Pa. echinata small-leaf variant was isolated from the other leaf variants through Scoot-Knott clustering. CONCLUSIONS: The chromosome diversity and the variation in the 2C DNA content reinforce that the actual taxonomy and clustering of the analyzed taxa requires more genera that were previously proposed. This fact indicates that taxonomy, phylogeny and cytoevolutionary inference related to the complex Caesalpinia group have to be done through integrative evaluation. |
format | Online Article Text |
id | pubmed-5896153 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-58961532018-04-20 Karyotype diversity and 2C DNA content in species of the Caesalpinia group Rodrigues, Polliana Silva Souza, Margarete Magalhães Melo, Cláusio Antônio Ferreira Pereira, Telma Nair Santana Corrêa, Ronan Xavier BMC Genet Research Article BACKGROUND: The Leguminosae family is the third-largest family of angiosperms, and Caesalpinioideae is its second-largest subfamily. A great number of species (approximately 205) are found in the Caesalpinia group within this subfamily; together with these species’ phenotypic plasticity and the similarities in their morphological descriptors, make this a complex group for taxonomic and phylogenetic studies. The objective of the present work was to evaluate the karyotypic diversity and the 2C DNA content variation in 10 species of the Caesalpinia group, representing six genera: Paubrasilia, Caesalpinia, Cenostigma, Poincianella, Erythrostemon and Libidibia. The GC-rich heterochromatin and 45S rDNA sites (which are used as chromosome markers) were located to evaluate the karyotype diversity in the clade. The variation in the 2C DNA content was determined through flow cytometry. RESULTS: The fluorochrome banding indicated that the chromomycin A(3)(+)/4′,6-diamidino-2-phenylindole(−) blocks were exclusively in the terminal regions of the chromosomes, coinciding with 45S rDNA sites in all analyzed species. Physical mapping of the species (through fluorescence in situ hybridization) revealed variation in the size of the hybridization signals and in the number and distribution of the 45S rDNA sites. All hybridization sites were in the terminal regions of the chromosomes. In addition, all species had a hybridization site in the fourth chromosome pair. The 2C DNA content ranged from 1.54 pg in Erythrostemon calycina to 2.82 pg in the Paubrasilia echinata large-leaf variant. The Pa. echinata small-leaf variant was isolated from the other leaf variants through Scoot-Knott clustering. CONCLUSIONS: The chromosome diversity and the variation in the 2C DNA content reinforce that the actual taxonomy and clustering of the analyzed taxa requires more genera that were previously proposed. This fact indicates that taxonomy, phylogeny and cytoevolutionary inference related to the complex Caesalpinia group have to be done through integrative evaluation. BioMed Central 2018-04-11 /pmc/articles/PMC5896153/ /pubmed/29642872 http://dx.doi.org/10.1186/s12863-018-0610-2 Text en © The Author(s). 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Rodrigues, Polliana Silva Souza, Margarete Magalhães Melo, Cláusio Antônio Ferreira Pereira, Telma Nair Santana Corrêa, Ronan Xavier Karyotype diversity and 2C DNA content in species of the Caesalpinia group |
title | Karyotype diversity and 2C DNA content in species of the Caesalpinia group |
title_full | Karyotype diversity and 2C DNA content in species of the Caesalpinia group |
title_fullStr | Karyotype diversity and 2C DNA content in species of the Caesalpinia group |
title_full_unstemmed | Karyotype diversity and 2C DNA content in species of the Caesalpinia group |
title_short | Karyotype diversity and 2C DNA content in species of the Caesalpinia group |
title_sort | karyotype diversity and 2c dna content in species of the caesalpinia group |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5896153/ https://www.ncbi.nlm.nih.gov/pubmed/29642872 http://dx.doi.org/10.1186/s12863-018-0610-2 |
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