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Digitization of natural objects with micro CT and photographs

In this paper, we present a three-dimensional (3D) digitization technique for natural objects, such as insects and plants. The key idea is to combine X-ray computed tomography (CT) and photographs to obtain both complicated 3D shapes and surface textures of target specimens. We measure a specimen by...

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Detalles Bibliográficos
Autores principales: Ijiri, Takashi, Todo, Hideki, Hirabayashi, Akira, Kohiyama, Kenji, Dobashi, Yoshinori
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5897013/
https://www.ncbi.nlm.nih.gov/pubmed/29649299
http://dx.doi.org/10.1371/journal.pone.0195852
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author Ijiri, Takashi
Todo, Hideki
Hirabayashi, Akira
Kohiyama, Kenji
Dobashi, Yoshinori
author_facet Ijiri, Takashi
Todo, Hideki
Hirabayashi, Akira
Kohiyama, Kenji
Dobashi, Yoshinori
author_sort Ijiri, Takashi
collection PubMed
description In this paper, we present a three-dimensional (3D) digitization technique for natural objects, such as insects and plants. The key idea is to combine X-ray computed tomography (CT) and photographs to obtain both complicated 3D shapes and surface textures of target specimens. We measure a specimen by using an X-ray CT device and a digital camera to obtain a CT volumetric image (volume) and multiple photographs. We then reconstruct a 3D model by segmenting the CT volume and generate a texture by projecting the photographs onto the model. To achieve this reconstruction, we introduce a technique for estimating a camera position for each photograph. We also present techniques for merging multiple textures generated from multiple photographs and recovering missing texture areas caused by occlusion. We illustrate the feasibility of our 3D digitization technique by digitizing 3D textured models of insects and flowers. The combination of X-ray CT and a digital camera makes it possible to successfully digitize specimens with complicated 3D structures accurately and allows us to browse both surface colors and internal structures.
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spelling pubmed-58970132018-05-04 Digitization of natural objects with micro CT and photographs Ijiri, Takashi Todo, Hideki Hirabayashi, Akira Kohiyama, Kenji Dobashi, Yoshinori PLoS One Research Article In this paper, we present a three-dimensional (3D) digitization technique for natural objects, such as insects and plants. The key idea is to combine X-ray computed tomography (CT) and photographs to obtain both complicated 3D shapes and surface textures of target specimens. We measure a specimen by using an X-ray CT device and a digital camera to obtain a CT volumetric image (volume) and multiple photographs. We then reconstruct a 3D model by segmenting the CT volume and generate a texture by projecting the photographs onto the model. To achieve this reconstruction, we introduce a technique for estimating a camera position for each photograph. We also present techniques for merging multiple textures generated from multiple photographs and recovering missing texture areas caused by occlusion. We illustrate the feasibility of our 3D digitization technique by digitizing 3D textured models of insects and flowers. The combination of X-ray CT and a digital camera makes it possible to successfully digitize specimens with complicated 3D structures accurately and allows us to browse both surface colors and internal structures. Public Library of Science 2018-04-12 /pmc/articles/PMC5897013/ /pubmed/29649299 http://dx.doi.org/10.1371/journal.pone.0195852 Text en © 2018 Ijiri et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Ijiri, Takashi
Todo, Hideki
Hirabayashi, Akira
Kohiyama, Kenji
Dobashi, Yoshinori
Digitization of natural objects with micro CT and photographs
title Digitization of natural objects with micro CT and photographs
title_full Digitization of natural objects with micro CT and photographs
title_fullStr Digitization of natural objects with micro CT and photographs
title_full_unstemmed Digitization of natural objects with micro CT and photographs
title_short Digitization of natural objects with micro CT and photographs
title_sort digitization of natural objects with micro ct and photographs
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5897013/
https://www.ncbi.nlm.nih.gov/pubmed/29649299
http://dx.doi.org/10.1371/journal.pone.0195852
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