Cargando…
Digitization of natural objects with micro CT and photographs
In this paper, we present a three-dimensional (3D) digitization technique for natural objects, such as insects and plants. The key idea is to combine X-ray computed tomography (CT) and photographs to obtain both complicated 3D shapes and surface textures of target specimens. We measure a specimen by...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5897013/ https://www.ncbi.nlm.nih.gov/pubmed/29649299 http://dx.doi.org/10.1371/journal.pone.0195852 |
_version_ | 1783313908203782144 |
---|---|
author | Ijiri, Takashi Todo, Hideki Hirabayashi, Akira Kohiyama, Kenji Dobashi, Yoshinori |
author_facet | Ijiri, Takashi Todo, Hideki Hirabayashi, Akira Kohiyama, Kenji Dobashi, Yoshinori |
author_sort | Ijiri, Takashi |
collection | PubMed |
description | In this paper, we present a three-dimensional (3D) digitization technique for natural objects, such as insects and plants. The key idea is to combine X-ray computed tomography (CT) and photographs to obtain both complicated 3D shapes and surface textures of target specimens. We measure a specimen by using an X-ray CT device and a digital camera to obtain a CT volumetric image (volume) and multiple photographs. We then reconstruct a 3D model by segmenting the CT volume and generate a texture by projecting the photographs onto the model. To achieve this reconstruction, we introduce a technique for estimating a camera position for each photograph. We also present techniques for merging multiple textures generated from multiple photographs and recovering missing texture areas caused by occlusion. We illustrate the feasibility of our 3D digitization technique by digitizing 3D textured models of insects and flowers. The combination of X-ray CT and a digital camera makes it possible to successfully digitize specimens with complicated 3D structures accurately and allows us to browse both surface colors and internal structures. |
format | Online Article Text |
id | pubmed-5897013 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-58970132018-05-04 Digitization of natural objects with micro CT and photographs Ijiri, Takashi Todo, Hideki Hirabayashi, Akira Kohiyama, Kenji Dobashi, Yoshinori PLoS One Research Article In this paper, we present a three-dimensional (3D) digitization technique for natural objects, such as insects and plants. The key idea is to combine X-ray computed tomography (CT) and photographs to obtain both complicated 3D shapes and surface textures of target specimens. We measure a specimen by using an X-ray CT device and a digital camera to obtain a CT volumetric image (volume) and multiple photographs. We then reconstruct a 3D model by segmenting the CT volume and generate a texture by projecting the photographs onto the model. To achieve this reconstruction, we introduce a technique for estimating a camera position for each photograph. We also present techniques for merging multiple textures generated from multiple photographs and recovering missing texture areas caused by occlusion. We illustrate the feasibility of our 3D digitization technique by digitizing 3D textured models of insects and flowers. The combination of X-ray CT and a digital camera makes it possible to successfully digitize specimens with complicated 3D structures accurately and allows us to browse both surface colors and internal structures. Public Library of Science 2018-04-12 /pmc/articles/PMC5897013/ /pubmed/29649299 http://dx.doi.org/10.1371/journal.pone.0195852 Text en © 2018 Ijiri et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Ijiri, Takashi Todo, Hideki Hirabayashi, Akira Kohiyama, Kenji Dobashi, Yoshinori Digitization of natural objects with micro CT and photographs |
title | Digitization of natural objects with micro CT and photographs |
title_full | Digitization of natural objects with micro CT and photographs |
title_fullStr | Digitization of natural objects with micro CT and photographs |
title_full_unstemmed | Digitization of natural objects with micro CT and photographs |
title_short | Digitization of natural objects with micro CT and photographs |
title_sort | digitization of natural objects with micro ct and photographs |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5897013/ https://www.ncbi.nlm.nih.gov/pubmed/29649299 http://dx.doi.org/10.1371/journal.pone.0195852 |
work_keys_str_mv | AT ijiritakashi digitizationofnaturalobjectswithmicroctandphotographs AT todohideki digitizationofnaturalobjectswithmicroctandphotographs AT hirabayashiakira digitizationofnaturalobjectswithmicroctandphotographs AT kohiyamakenji digitizationofnaturalobjectswithmicroctandphotographs AT dobashiyoshinori digitizationofnaturalobjectswithmicroctandphotographs |