Cargando…
The Distributions and Boundary of Two Distinct, Local Forms of Japanese Pond Frog, Pelophylax porosus brevipodus, Inferred From Sequences of Mitochondrial DNA
The Nagoya Daruma pond frog Pelophylax porosus brevipodus is distributed in western Japan and is traditionally divided into two local forms: the Okayama form in the west and the Nagoya form in the east. These two forms are genetically differentiated, but have never been defined taxonomically because...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5900786/ https://www.ncbi.nlm.nih.gov/pubmed/29686694 http://dx.doi.org/10.3389/fgene.2018.00079 |
_version_ | 1783314479278194688 |
---|---|
author | Nagai, Yukari Doi, Toshio Ito, Kunio Yuasa, Yoshiaki Fujitani, Takeshi Naito, Jun-ichi Ogata, Mitsuaki Miura, Ikuo |
author_facet | Nagai, Yukari Doi, Toshio Ito, Kunio Yuasa, Yoshiaki Fujitani, Takeshi Naito, Jun-ichi Ogata, Mitsuaki Miura, Ikuo |
author_sort | Nagai, Yukari |
collection | PubMed |
description | The Nagoya Daruma pond frog Pelophylax porosus brevipodus is distributed in western Japan and is traditionally divided into two local forms: the Okayama form in the west and the Nagoya form in the east. These two forms are genetically differentiated, but have never been defined taxonomically because their distributions are unclear to date. To complete the distributions and identify the boundary of the two forms, we genetically investigated 16 populations including eight populations located within the unexamined area. We found that the distributional boundary is located within a small area of Hyogo Prefecture where haplotypes of mitochondrial cytochrome b (cytb) and D-loop region corresponding to the two forms co-existed. On the other hand, the polymorphic site of the nuclear gene SOX3 revealed introgression over the boundary into Okayama cytb clade. These results suggest that the two forms were geographically isolated from each other in the past, and secondarily contacted and then accepted one-way introgression. As a next step of the research, taxonomic approach is expected to define the two forms. |
format | Online Article Text |
id | pubmed-5900786 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-59007862018-04-23 The Distributions and Boundary of Two Distinct, Local Forms of Japanese Pond Frog, Pelophylax porosus brevipodus, Inferred From Sequences of Mitochondrial DNA Nagai, Yukari Doi, Toshio Ito, Kunio Yuasa, Yoshiaki Fujitani, Takeshi Naito, Jun-ichi Ogata, Mitsuaki Miura, Ikuo Front Genet Genetics The Nagoya Daruma pond frog Pelophylax porosus brevipodus is distributed in western Japan and is traditionally divided into two local forms: the Okayama form in the west and the Nagoya form in the east. These two forms are genetically differentiated, but have never been defined taxonomically because their distributions are unclear to date. To complete the distributions and identify the boundary of the two forms, we genetically investigated 16 populations including eight populations located within the unexamined area. We found that the distributional boundary is located within a small area of Hyogo Prefecture where haplotypes of mitochondrial cytochrome b (cytb) and D-loop region corresponding to the two forms co-existed. On the other hand, the polymorphic site of the nuclear gene SOX3 revealed introgression over the boundary into Okayama cytb clade. These results suggest that the two forms were geographically isolated from each other in the past, and secondarily contacted and then accepted one-way introgression. As a next step of the research, taxonomic approach is expected to define the two forms. Frontiers Media S.A. 2018-04-05 /pmc/articles/PMC5900786/ /pubmed/29686694 http://dx.doi.org/10.3389/fgene.2018.00079 Text en Copyright © 2018 Nagai, Doi, Ito, Yuasa, Fujitani, Naito, Ogata and Miura. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Genetics Nagai, Yukari Doi, Toshio Ito, Kunio Yuasa, Yoshiaki Fujitani, Takeshi Naito, Jun-ichi Ogata, Mitsuaki Miura, Ikuo The Distributions and Boundary of Two Distinct, Local Forms of Japanese Pond Frog, Pelophylax porosus brevipodus, Inferred From Sequences of Mitochondrial DNA |
title | The Distributions and Boundary of Two Distinct, Local Forms of Japanese Pond Frog, Pelophylax porosus brevipodus, Inferred From Sequences of Mitochondrial DNA |
title_full | The Distributions and Boundary of Two Distinct, Local Forms of Japanese Pond Frog, Pelophylax porosus brevipodus, Inferred From Sequences of Mitochondrial DNA |
title_fullStr | The Distributions and Boundary of Two Distinct, Local Forms of Japanese Pond Frog, Pelophylax porosus brevipodus, Inferred From Sequences of Mitochondrial DNA |
title_full_unstemmed | The Distributions and Boundary of Two Distinct, Local Forms of Japanese Pond Frog, Pelophylax porosus brevipodus, Inferred From Sequences of Mitochondrial DNA |
title_short | The Distributions and Boundary of Two Distinct, Local Forms of Japanese Pond Frog, Pelophylax porosus brevipodus, Inferred From Sequences of Mitochondrial DNA |
title_sort | distributions and boundary of two distinct, local forms of japanese pond frog, pelophylax porosus brevipodus, inferred from sequences of mitochondrial dna |
topic | Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5900786/ https://www.ncbi.nlm.nih.gov/pubmed/29686694 http://dx.doi.org/10.3389/fgene.2018.00079 |
work_keys_str_mv | AT nagaiyukari thedistributionsandboundaryoftwodistinctlocalformsofjapanesepondfrogpelophylaxporosusbrevipodusinferredfromsequencesofmitochondrialdna AT doitoshio thedistributionsandboundaryoftwodistinctlocalformsofjapanesepondfrogpelophylaxporosusbrevipodusinferredfromsequencesofmitochondrialdna AT itokunio thedistributionsandboundaryoftwodistinctlocalformsofjapanesepondfrogpelophylaxporosusbrevipodusinferredfromsequencesofmitochondrialdna AT yuasayoshiaki thedistributionsandboundaryoftwodistinctlocalformsofjapanesepondfrogpelophylaxporosusbrevipodusinferredfromsequencesofmitochondrialdna AT fujitanitakeshi thedistributionsandboundaryoftwodistinctlocalformsofjapanesepondfrogpelophylaxporosusbrevipodusinferredfromsequencesofmitochondrialdna AT naitojunichi thedistributionsandboundaryoftwodistinctlocalformsofjapanesepondfrogpelophylaxporosusbrevipodusinferredfromsequencesofmitochondrialdna AT ogatamitsuaki thedistributionsandboundaryoftwodistinctlocalformsofjapanesepondfrogpelophylaxporosusbrevipodusinferredfromsequencesofmitochondrialdna AT miuraikuo thedistributionsandboundaryoftwodistinctlocalformsofjapanesepondfrogpelophylaxporosusbrevipodusinferredfromsequencesofmitochondrialdna AT nagaiyukari distributionsandboundaryoftwodistinctlocalformsofjapanesepondfrogpelophylaxporosusbrevipodusinferredfromsequencesofmitochondrialdna AT doitoshio distributionsandboundaryoftwodistinctlocalformsofjapanesepondfrogpelophylaxporosusbrevipodusinferredfromsequencesofmitochondrialdna AT itokunio distributionsandboundaryoftwodistinctlocalformsofjapanesepondfrogpelophylaxporosusbrevipodusinferredfromsequencesofmitochondrialdna AT yuasayoshiaki distributionsandboundaryoftwodistinctlocalformsofjapanesepondfrogpelophylaxporosusbrevipodusinferredfromsequencesofmitochondrialdna AT fujitanitakeshi distributionsandboundaryoftwodistinctlocalformsofjapanesepondfrogpelophylaxporosusbrevipodusinferredfromsequencesofmitochondrialdna AT naitojunichi distributionsandboundaryoftwodistinctlocalformsofjapanesepondfrogpelophylaxporosusbrevipodusinferredfromsequencesofmitochondrialdna AT ogatamitsuaki distributionsandboundaryoftwodistinctlocalformsofjapanesepondfrogpelophylaxporosusbrevipodusinferredfromsequencesofmitochondrialdna AT miuraikuo distributionsandboundaryoftwodistinctlocalformsofjapanesepondfrogpelophylaxporosusbrevipodusinferredfromsequencesofmitochondrialdna |