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MicroRNA meta-signature of oral cancer: evidence from a meta-analysis
AIM: It was the aim of the study to identify commonly deregulated miRNAs in oral cancer patients by performing a meta-analysis of previously published miRNA expression profiles in cancer and matched normal non-cancerous tissue in such patients. MATERIAL AND METHODS: Meta-analysis included seven inde...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5901467/ https://www.ncbi.nlm.nih.gov/pubmed/29482431 http://dx.doi.org/10.1080/03009734.2018.1439551 |
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author | Zeljic, Katarina Jovanovic, Ivan Jovanovic, Jasmina Magic, Zvonko Stankovic, Aleksandra Supic, Gordana |
author_facet | Zeljic, Katarina Jovanovic, Ivan Jovanovic, Jasmina Magic, Zvonko Stankovic, Aleksandra Supic, Gordana |
author_sort | Zeljic, Katarina |
collection | PubMed |
description | AIM: It was the aim of the study to identify commonly deregulated miRNAs in oral cancer patients by performing a meta-analysis of previously published miRNA expression profiles in cancer and matched normal non-cancerous tissue in such patients. MATERIAL AND METHODS: Meta-analysis included seven independent studies analyzed by a vote-counting method followed by bioinformatic enrichment analysis. RESULTS: Amongst seven independent studies included in the meta-analysis, 20 miRNAs were found to be deregulated in oral cancer when compared with non-cancerous tissue. Eleven miRNAs were consistently up-regulated in three or more studies (miR-21-5p, miR-31-5p, miR-135b-5p, miR-31-3p, miR-93-5p, miR-34b-5p, miR-424-5p, miR-18a-5p, miR-455-3p, miR-450a-5p, miR-21-3p), and nine were down-regulated (miR-139-5p, miR-30a-3p, miR-376c-3p, miR-885-5p, miR-375, miR-486-5p, miR-411-5p, miR-133a-3p, miR-30a-5p). The meta-signature of identified miRNAs was functionally characterized by KEGG enrichment analysis. Twenty-four KEGG pathways were significantly enriched, and TGF-beta signaling was the most enriched signaling pathway. The highest number of meta-signature miRNAs was involved in the sphingolipid signaling pathway. Natural killer cell-mediated cytotoxicity was the pathway with most genes regulated by identified miRNAs. The rest of the enriched pathways in our miRNA list describe different malignancies and signaling. CONCLUSIONS: The identified miRNA meta-signature might be considered as a potential battery of biomarkers when distinguishing oral cancer tissue from normal, non-cancerous tissue. Further mechanistic studies are warranted in order to confirm and fully elucidate the role of deregulated miRNAs in oral cancer. |
format | Online Article Text |
id | pubmed-5901467 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-59014672018-04-23 MicroRNA meta-signature of oral cancer: evidence from a meta-analysis Zeljic, Katarina Jovanovic, Ivan Jovanovic, Jasmina Magic, Zvonko Stankovic, Aleksandra Supic, Gordana Ups J Med Sci Articles AIM: It was the aim of the study to identify commonly deregulated miRNAs in oral cancer patients by performing a meta-analysis of previously published miRNA expression profiles in cancer and matched normal non-cancerous tissue in such patients. MATERIAL AND METHODS: Meta-analysis included seven independent studies analyzed by a vote-counting method followed by bioinformatic enrichment analysis. RESULTS: Amongst seven independent studies included in the meta-analysis, 20 miRNAs were found to be deregulated in oral cancer when compared with non-cancerous tissue. Eleven miRNAs were consistently up-regulated in three or more studies (miR-21-5p, miR-31-5p, miR-135b-5p, miR-31-3p, miR-93-5p, miR-34b-5p, miR-424-5p, miR-18a-5p, miR-455-3p, miR-450a-5p, miR-21-3p), and nine were down-regulated (miR-139-5p, miR-30a-3p, miR-376c-3p, miR-885-5p, miR-375, miR-486-5p, miR-411-5p, miR-133a-3p, miR-30a-5p). The meta-signature of identified miRNAs was functionally characterized by KEGG enrichment analysis. Twenty-four KEGG pathways were significantly enriched, and TGF-beta signaling was the most enriched signaling pathway. The highest number of meta-signature miRNAs was involved in the sphingolipid signaling pathway. Natural killer cell-mediated cytotoxicity was the pathway with most genes regulated by identified miRNAs. The rest of the enriched pathways in our miRNA list describe different malignancies and signaling. CONCLUSIONS: The identified miRNA meta-signature might be considered as a potential battery of biomarkers when distinguishing oral cancer tissue from normal, non-cancerous tissue. Further mechanistic studies are warranted in order to confirm and fully elucidate the role of deregulated miRNAs in oral cancer. Taylor & Francis 2018-03 2018-02-26 /pmc/articles/PMC5901467/ /pubmed/29482431 http://dx.doi.org/10.1080/03009734.2018.1439551 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Articles Zeljic, Katarina Jovanovic, Ivan Jovanovic, Jasmina Magic, Zvonko Stankovic, Aleksandra Supic, Gordana MicroRNA meta-signature of oral cancer: evidence from a meta-analysis |
title | MicroRNA meta-signature of oral cancer: evidence from a meta-analysis |
title_full | MicroRNA meta-signature of oral cancer: evidence from a meta-analysis |
title_fullStr | MicroRNA meta-signature of oral cancer: evidence from a meta-analysis |
title_full_unstemmed | MicroRNA meta-signature of oral cancer: evidence from a meta-analysis |
title_short | MicroRNA meta-signature of oral cancer: evidence from a meta-analysis |
title_sort | microrna meta-signature of oral cancer: evidence from a meta-analysis |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5901467/ https://www.ncbi.nlm.nih.gov/pubmed/29482431 http://dx.doi.org/10.1080/03009734.2018.1439551 |
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