Cargando…

Repetitive DNAs and shrink genomes: A chromosomal analysis in nine Columbidae species (Aves, Columbiformes)

An extensive karyotype variation is found among species belonging to the Columbidae family of birds (Columbiformes), both in diploid number and chromosomal morphology. Although clusters of repetitive DNA sequences play an important role in chromosomal instability, and therefore in chromosomal rearra...

Descripción completa

Detalles Bibliográficos
Autores principales: Kretschmer, Rafael, de Oliveira, Thays Duarte, de Oliveira Furo, Ivanete, Oliveira Silva, Fabio Augusto, Gunski, Ricardo José, del Valle Garnero, Analía, de Bello Cioffi, Marcelo, de Oliveira, Edivaldo Herculano Corrêa, de Freitas, Thales Renato Ochotorena
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Sociedade Brasileira de Genética 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5901494/
https://www.ncbi.nlm.nih.gov/pubmed/29473932
http://dx.doi.org/10.1590/1678-4685-GMB-2017-0048
_version_ 1783314625014530048
author Kretschmer, Rafael
de Oliveira, Thays Duarte
de Oliveira Furo, Ivanete
Oliveira Silva, Fabio Augusto
Gunski, Ricardo José
del Valle Garnero, Analía
de Bello Cioffi, Marcelo
de Oliveira, Edivaldo Herculano Corrêa
de Freitas, Thales Renato Ochotorena
author_facet Kretschmer, Rafael
de Oliveira, Thays Duarte
de Oliveira Furo, Ivanete
Oliveira Silva, Fabio Augusto
Gunski, Ricardo José
del Valle Garnero, Analía
de Bello Cioffi, Marcelo
de Oliveira, Edivaldo Herculano Corrêa
de Freitas, Thales Renato Ochotorena
author_sort Kretschmer, Rafael
collection PubMed
description An extensive karyotype variation is found among species belonging to the Columbidae family of birds (Columbiformes), both in diploid number and chromosomal morphology. Although clusters of repetitive DNA sequences play an important role in chromosomal instability, and therefore in chromosomal rearrangements, little is known about their distribution and amount in avian genomes. The aim of this study was to analyze the distribution of 11 distinct microsatellite sequences, as well as clusters of 18S rDNA, in nine different Columbidae species, correlating their distribution with the occurrence of chromosomal rearrangements. We found 2n values ranging from 76 to 86 and nine out of 11 microsatellite sequences showed distinct hybridization signals among the analyzed species. The accumulation of microsatellite repeats was found preferentially in the centromeric region of macro and microchromosomes, and in the W chromosome. Additionally, pair 2 showed the accumulation of several microsatellites in different combinations and locations in the distinct species, suggesting the occurrence of intrachromosomal rearrangements, as well as a possible fission of this pair in Geotrygon species. Therefore, although birds have a smaller amount of repetitive sequences when compared to other Tetrapoda, these seem to play an important role in the karyotype evolution of these species.
format Online
Article
Text
id pubmed-5901494
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Sociedade Brasileira de Genética
record_format MEDLINE/PubMed
spelling pubmed-59014942018-04-23 Repetitive DNAs and shrink genomes: A chromosomal analysis in nine Columbidae species (Aves, Columbiformes) Kretschmer, Rafael de Oliveira, Thays Duarte de Oliveira Furo, Ivanete Oliveira Silva, Fabio Augusto Gunski, Ricardo José del Valle Garnero, Analía de Bello Cioffi, Marcelo de Oliveira, Edivaldo Herculano Corrêa de Freitas, Thales Renato Ochotorena Genet Mol Biol Animal Genetics An extensive karyotype variation is found among species belonging to the Columbidae family of birds (Columbiformes), both in diploid number and chromosomal morphology. Although clusters of repetitive DNA sequences play an important role in chromosomal instability, and therefore in chromosomal rearrangements, little is known about their distribution and amount in avian genomes. The aim of this study was to analyze the distribution of 11 distinct microsatellite sequences, as well as clusters of 18S rDNA, in nine different Columbidae species, correlating their distribution with the occurrence of chromosomal rearrangements. We found 2n values ranging from 76 to 86 and nine out of 11 microsatellite sequences showed distinct hybridization signals among the analyzed species. The accumulation of microsatellite repeats was found preferentially in the centromeric region of macro and microchromosomes, and in the W chromosome. Additionally, pair 2 showed the accumulation of several microsatellites in different combinations and locations in the distinct species, suggesting the occurrence of intrachromosomal rearrangements, as well as a possible fission of this pair in Geotrygon species. Therefore, although birds have a smaller amount of repetitive sequences when compared to other Tetrapoda, these seem to play an important role in the karyotype evolution of these species. Sociedade Brasileira de Genética 2018-02-19 2018 /pmc/articles/PMC5901494/ /pubmed/29473932 http://dx.doi.org/10.1590/1678-4685-GMB-2017-0048 Text en Copyright © 2018, Sociedade Brasileira de Genética. https://creativecommons.org/licenses/by/4.0/ License information: This is an open-access article distributed under the terms of the Creative Commons Attribution License (type CC-BY), which permits unrestricted use, distribution and reproduction in any medium, provided the original article is properly cited.
spellingShingle Animal Genetics
Kretschmer, Rafael
de Oliveira, Thays Duarte
de Oliveira Furo, Ivanete
Oliveira Silva, Fabio Augusto
Gunski, Ricardo José
del Valle Garnero, Analía
de Bello Cioffi, Marcelo
de Oliveira, Edivaldo Herculano Corrêa
de Freitas, Thales Renato Ochotorena
Repetitive DNAs and shrink genomes: A chromosomal analysis in nine Columbidae species (Aves, Columbiformes)
title Repetitive DNAs and shrink genomes: A chromosomal analysis in nine Columbidae species (Aves, Columbiformes)
title_full Repetitive DNAs and shrink genomes: A chromosomal analysis in nine Columbidae species (Aves, Columbiformes)
title_fullStr Repetitive DNAs and shrink genomes: A chromosomal analysis in nine Columbidae species (Aves, Columbiformes)
title_full_unstemmed Repetitive DNAs and shrink genomes: A chromosomal analysis in nine Columbidae species (Aves, Columbiformes)
title_short Repetitive DNAs and shrink genomes: A chromosomal analysis in nine Columbidae species (Aves, Columbiformes)
title_sort repetitive dnas and shrink genomes: a chromosomal analysis in nine columbidae species (aves, columbiformes)
topic Animal Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5901494/
https://www.ncbi.nlm.nih.gov/pubmed/29473932
http://dx.doi.org/10.1590/1678-4685-GMB-2017-0048
work_keys_str_mv AT kretschmerrafael repetitivednasandshrinkgenomesachromosomalanalysisinninecolumbidaespeciesavescolumbiformes
AT deoliveirathaysduarte repetitivednasandshrinkgenomesachromosomalanalysisinninecolumbidaespeciesavescolumbiformes
AT deoliveirafuroivanete repetitivednasandshrinkgenomesachromosomalanalysisinninecolumbidaespeciesavescolumbiformes
AT oliveirasilvafabioaugusto repetitivednasandshrinkgenomesachromosomalanalysisinninecolumbidaespeciesavescolumbiformes
AT gunskiricardojose repetitivednasandshrinkgenomesachromosomalanalysisinninecolumbidaespeciesavescolumbiformes
AT delvallegarneroanalia repetitivednasandshrinkgenomesachromosomalanalysisinninecolumbidaespeciesavescolumbiformes
AT debellocioffimarcelo repetitivednasandshrinkgenomesachromosomalanalysisinninecolumbidaespeciesavescolumbiformes
AT deoliveiraedivaldoherculanocorrea repetitivednasandshrinkgenomesachromosomalanalysisinninecolumbidaespeciesavescolumbiformes
AT defreitasthalesrenatoochotorena repetitivednasandshrinkgenomesachromosomalanalysisinninecolumbidaespeciesavescolumbiformes