Cargando…
Repetitive DNAs and shrink genomes: A chromosomal analysis in nine Columbidae species (Aves, Columbiformes)
An extensive karyotype variation is found among species belonging to the Columbidae family of birds (Columbiformes), both in diploid number and chromosomal morphology. Although clusters of repetitive DNA sequences play an important role in chromosomal instability, and therefore in chromosomal rearra...
Autores principales: | , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Sociedade Brasileira de Genética
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5901494/ https://www.ncbi.nlm.nih.gov/pubmed/29473932 http://dx.doi.org/10.1590/1678-4685-GMB-2017-0048 |
_version_ | 1783314625014530048 |
---|---|
author | Kretschmer, Rafael de Oliveira, Thays Duarte de Oliveira Furo, Ivanete Oliveira Silva, Fabio Augusto Gunski, Ricardo José del Valle Garnero, Analía de Bello Cioffi, Marcelo de Oliveira, Edivaldo Herculano Corrêa de Freitas, Thales Renato Ochotorena |
author_facet | Kretschmer, Rafael de Oliveira, Thays Duarte de Oliveira Furo, Ivanete Oliveira Silva, Fabio Augusto Gunski, Ricardo José del Valle Garnero, Analía de Bello Cioffi, Marcelo de Oliveira, Edivaldo Herculano Corrêa de Freitas, Thales Renato Ochotorena |
author_sort | Kretschmer, Rafael |
collection | PubMed |
description | An extensive karyotype variation is found among species belonging to the Columbidae family of birds (Columbiformes), both in diploid number and chromosomal morphology. Although clusters of repetitive DNA sequences play an important role in chromosomal instability, and therefore in chromosomal rearrangements, little is known about their distribution and amount in avian genomes. The aim of this study was to analyze the distribution of 11 distinct microsatellite sequences, as well as clusters of 18S rDNA, in nine different Columbidae species, correlating their distribution with the occurrence of chromosomal rearrangements. We found 2n values ranging from 76 to 86 and nine out of 11 microsatellite sequences showed distinct hybridization signals among the analyzed species. The accumulation of microsatellite repeats was found preferentially in the centromeric region of macro and microchromosomes, and in the W chromosome. Additionally, pair 2 showed the accumulation of several microsatellites in different combinations and locations in the distinct species, suggesting the occurrence of intrachromosomal rearrangements, as well as a possible fission of this pair in Geotrygon species. Therefore, although birds have a smaller amount of repetitive sequences when compared to other Tetrapoda, these seem to play an important role in the karyotype evolution of these species. |
format | Online Article Text |
id | pubmed-5901494 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Sociedade Brasileira de Genética |
record_format | MEDLINE/PubMed |
spelling | pubmed-59014942018-04-23 Repetitive DNAs and shrink genomes: A chromosomal analysis in nine Columbidae species (Aves, Columbiformes) Kretschmer, Rafael de Oliveira, Thays Duarte de Oliveira Furo, Ivanete Oliveira Silva, Fabio Augusto Gunski, Ricardo José del Valle Garnero, Analía de Bello Cioffi, Marcelo de Oliveira, Edivaldo Herculano Corrêa de Freitas, Thales Renato Ochotorena Genet Mol Biol Animal Genetics An extensive karyotype variation is found among species belonging to the Columbidae family of birds (Columbiformes), both in diploid number and chromosomal morphology. Although clusters of repetitive DNA sequences play an important role in chromosomal instability, and therefore in chromosomal rearrangements, little is known about their distribution and amount in avian genomes. The aim of this study was to analyze the distribution of 11 distinct microsatellite sequences, as well as clusters of 18S rDNA, in nine different Columbidae species, correlating their distribution with the occurrence of chromosomal rearrangements. We found 2n values ranging from 76 to 86 and nine out of 11 microsatellite sequences showed distinct hybridization signals among the analyzed species. The accumulation of microsatellite repeats was found preferentially in the centromeric region of macro and microchromosomes, and in the W chromosome. Additionally, pair 2 showed the accumulation of several microsatellites in different combinations and locations in the distinct species, suggesting the occurrence of intrachromosomal rearrangements, as well as a possible fission of this pair in Geotrygon species. Therefore, although birds have a smaller amount of repetitive sequences when compared to other Tetrapoda, these seem to play an important role in the karyotype evolution of these species. Sociedade Brasileira de Genética 2018-02-19 2018 /pmc/articles/PMC5901494/ /pubmed/29473932 http://dx.doi.org/10.1590/1678-4685-GMB-2017-0048 Text en Copyright © 2018, Sociedade Brasileira de Genética. https://creativecommons.org/licenses/by/4.0/ License information: This is an open-access article distributed under the terms of the Creative Commons Attribution License (type CC-BY), which permits unrestricted use, distribution and reproduction in any medium, provided the original article is properly cited. |
spellingShingle | Animal Genetics Kretschmer, Rafael de Oliveira, Thays Duarte de Oliveira Furo, Ivanete Oliveira Silva, Fabio Augusto Gunski, Ricardo José del Valle Garnero, Analía de Bello Cioffi, Marcelo de Oliveira, Edivaldo Herculano Corrêa de Freitas, Thales Renato Ochotorena Repetitive DNAs and shrink genomes: A chromosomal analysis in nine Columbidae species (Aves, Columbiformes) |
title | Repetitive DNAs and shrink genomes: A chromosomal analysis in nine
Columbidae species (Aves, Columbiformes) |
title_full | Repetitive DNAs and shrink genomes: A chromosomal analysis in nine
Columbidae species (Aves, Columbiformes) |
title_fullStr | Repetitive DNAs and shrink genomes: A chromosomal analysis in nine
Columbidae species (Aves, Columbiformes) |
title_full_unstemmed | Repetitive DNAs and shrink genomes: A chromosomal analysis in nine
Columbidae species (Aves, Columbiformes) |
title_short | Repetitive DNAs and shrink genomes: A chromosomal analysis in nine
Columbidae species (Aves, Columbiformes) |
title_sort | repetitive dnas and shrink genomes: a chromosomal analysis in nine
columbidae species (aves, columbiformes) |
topic | Animal Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5901494/ https://www.ncbi.nlm.nih.gov/pubmed/29473932 http://dx.doi.org/10.1590/1678-4685-GMB-2017-0048 |
work_keys_str_mv | AT kretschmerrafael repetitivednasandshrinkgenomesachromosomalanalysisinninecolumbidaespeciesavescolumbiformes AT deoliveirathaysduarte repetitivednasandshrinkgenomesachromosomalanalysisinninecolumbidaespeciesavescolumbiformes AT deoliveirafuroivanete repetitivednasandshrinkgenomesachromosomalanalysisinninecolumbidaespeciesavescolumbiformes AT oliveirasilvafabioaugusto repetitivednasandshrinkgenomesachromosomalanalysisinninecolumbidaespeciesavescolumbiformes AT gunskiricardojose repetitivednasandshrinkgenomesachromosomalanalysisinninecolumbidaespeciesavescolumbiformes AT delvallegarneroanalia repetitivednasandshrinkgenomesachromosomalanalysisinninecolumbidaespeciesavescolumbiformes AT debellocioffimarcelo repetitivednasandshrinkgenomesachromosomalanalysisinninecolumbidaespeciesavescolumbiformes AT deoliveiraedivaldoherculanocorrea repetitivednasandshrinkgenomesachromosomalanalysisinninecolumbidaespeciesavescolumbiformes AT defreitasthalesrenatoochotorena repetitivednasandshrinkgenomesachromosomalanalysisinninecolumbidaespeciesavescolumbiformes |