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Contribution of DNA repair xeroderma pigmentosum group D genotypes to pancreatic cancer risk in the Chinese Han population
This study aimed to determine the association between the polymorphisms and haplotypes in the xeroderma pigmentosum group D (XPD) gene and the risk of pancreatic cancer in the Chinese Han population. SNaPshot was used for genotyping six SNP sites of the XPD gene. Comparisons of the correlations betw...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Sociedade Brasileira de Genética
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5901508/ https://www.ncbi.nlm.nih.gov/pubmed/29260835 http://dx.doi.org/10.1590/1678-4685-GMB-2017-0033 |
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author | Yan, Dong Liang, Xiao-Hui Ding, Wei Xu, Xin-Jian Wang, Xi-Yan |
author_facet | Yan, Dong Liang, Xiao-Hui Ding, Wei Xu, Xin-Jian Wang, Xi-Yan |
author_sort | Yan, Dong |
collection | PubMed |
description | This study aimed to determine the association between the polymorphisms and haplotypes in the xeroderma pigmentosum group D (XPD) gene and the risk of pancreatic cancer in the Chinese Han population. SNaPshot was used for genotyping six SNP sites of the XPD gene. Comparisons of the correlations between different genotypes in combination with smoking and the susceptibility to pancreatic cancer were performed. Individual pancreatic cancer risk in patients who carry mutant C alleles (AC, CC, and AC+CC) at rs13181 increased (p < 0.05). Taking non-smoking individuals who carry the AA genotype as a reference, and non-smoking individuals who carry mutant allele C (AC+CC), the risk of pancreatic cancer increased by 3.343 times in individuals who smoked ≥ 20 cigarettes daily, 3.309 times in individuals who smoked ≥ 14 packs per year, 5.011 times in individuals who smoked ≥ 24 packs per year, and 4.013 times in the individuals who smoked ≥ 37 packs per year (P < 0.05). In addition, haplotype analysis revealed that haplotype AGG, which comprised rs13181, rs3916874 and rs238415, was associated with a 1.401-fold increase in pancreatic cancer risk (p < 0.05). We conclude that the polymorphism of XPD Lys751Gln (rs13181) in combination with smoking contributes to increased risk of pancreatic cancer in the Chinese Han population. Haplotype AGG might be a susceptibility haplotype for pancreatic cancer. |
format | Online Article Text |
id | pubmed-5901508 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Sociedade Brasileira de Genética |
record_format | MEDLINE/PubMed |
spelling | pubmed-59015082018-04-23 Contribution of DNA repair xeroderma pigmentosum group D genotypes to pancreatic cancer risk in the Chinese Han population Yan, Dong Liang, Xiao-Hui Ding, Wei Xu, Xin-Jian Wang, Xi-Yan Genet Mol Biol Human and Medical Genetics This study aimed to determine the association between the polymorphisms and haplotypes in the xeroderma pigmentosum group D (XPD) gene and the risk of pancreatic cancer in the Chinese Han population. SNaPshot was used for genotyping six SNP sites of the XPD gene. Comparisons of the correlations between different genotypes in combination with smoking and the susceptibility to pancreatic cancer were performed. Individual pancreatic cancer risk in patients who carry mutant C alleles (AC, CC, and AC+CC) at rs13181 increased (p < 0.05). Taking non-smoking individuals who carry the AA genotype as a reference, and non-smoking individuals who carry mutant allele C (AC+CC), the risk of pancreatic cancer increased by 3.343 times in individuals who smoked ≥ 20 cigarettes daily, 3.309 times in individuals who smoked ≥ 14 packs per year, 5.011 times in individuals who smoked ≥ 24 packs per year, and 4.013 times in the individuals who smoked ≥ 37 packs per year (P < 0.05). In addition, haplotype analysis revealed that haplotype AGG, which comprised rs13181, rs3916874 and rs238415, was associated with a 1.401-fold increase in pancreatic cancer risk (p < 0.05). We conclude that the polymorphism of XPD Lys751Gln (rs13181) in combination with smoking contributes to increased risk of pancreatic cancer in the Chinese Han population. Haplotype AGG might be a susceptibility haplotype for pancreatic cancer. Sociedade Brasileira de Genética 2017-12-18 2018 /pmc/articles/PMC5901508/ /pubmed/29260835 http://dx.doi.org/10.1590/1678-4685-GMB-2017-0033 Text en Copyright © 2017, Sociedade Brasileira de Genética. https://creativecommons.org/licenses/by/4.0/ License information: This is an open-access article distributed under the terms of the Creative Commons Attribution License (type CC-BY), which permits unrestricted use, distribution and reproduction in any medium, provided the original article is properly cited. |
spellingShingle | Human and Medical Genetics Yan, Dong Liang, Xiao-Hui Ding, Wei Xu, Xin-Jian Wang, Xi-Yan Contribution of DNA repair xeroderma pigmentosum group D genotypes to pancreatic cancer risk in the Chinese Han population |
title | Contribution of DNA repair xeroderma pigmentosum group D genotypes to
pancreatic cancer risk in the Chinese Han population |
title_full | Contribution of DNA repair xeroderma pigmentosum group D genotypes to
pancreatic cancer risk in the Chinese Han population |
title_fullStr | Contribution of DNA repair xeroderma pigmentosum group D genotypes to
pancreatic cancer risk in the Chinese Han population |
title_full_unstemmed | Contribution of DNA repair xeroderma pigmentosum group D genotypes to
pancreatic cancer risk in the Chinese Han population |
title_short | Contribution of DNA repair xeroderma pigmentosum group D genotypes to
pancreatic cancer risk in the Chinese Han population |
title_sort | contribution of dna repair xeroderma pigmentosum group d genotypes to
pancreatic cancer risk in the chinese han population |
topic | Human and Medical Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5901508/ https://www.ncbi.nlm.nih.gov/pubmed/29260835 http://dx.doi.org/10.1590/1678-4685-GMB-2017-0033 |
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