Cargando…

Contribution of DNA repair xeroderma pigmentosum group D genotypes to pancreatic cancer risk in the Chinese Han population

This study aimed to determine the association between the polymorphisms and haplotypes in the xeroderma pigmentosum group D (XPD) gene and the risk of pancreatic cancer in the Chinese Han population. SNaPshot was used for genotyping six SNP sites of the XPD gene. Comparisons of the correlations betw...

Descripción completa

Detalles Bibliográficos
Autores principales: Yan, Dong, Liang, Xiao-Hui, Ding, Wei, Xu, Xin-Jian, Wang, Xi-Yan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Sociedade Brasileira de Genética 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5901508/
https://www.ncbi.nlm.nih.gov/pubmed/29260835
http://dx.doi.org/10.1590/1678-4685-GMB-2017-0033
_version_ 1783314628354244608
author Yan, Dong
Liang, Xiao-Hui
Ding, Wei
Xu, Xin-Jian
Wang, Xi-Yan
author_facet Yan, Dong
Liang, Xiao-Hui
Ding, Wei
Xu, Xin-Jian
Wang, Xi-Yan
author_sort Yan, Dong
collection PubMed
description This study aimed to determine the association between the polymorphisms and haplotypes in the xeroderma pigmentosum group D (XPD) gene and the risk of pancreatic cancer in the Chinese Han population. SNaPshot was used for genotyping six SNP sites of the XPD gene. Comparisons of the correlations between different genotypes in combination with smoking and the susceptibility to pancreatic cancer were performed. Individual pancreatic cancer risk in patients who carry mutant C alleles (AC, CC, and AC+CC) at rs13181 increased (p < 0.05). Taking non-smoking individuals who carry the AA genotype as a reference, and non-smoking individuals who carry mutant allele C (AC+CC), the risk of pancreatic cancer increased by 3.343 times in individuals who smoked ≥ 20 cigarettes daily, 3.309 times in individuals who smoked ≥ 14 packs per year, 5.011 times in individuals who smoked ≥ 24 packs per year, and 4.013 times in the individuals who smoked ≥ 37 packs per year (P < 0.05). In addition, haplotype analysis revealed that haplotype AGG, which comprised rs13181, rs3916874 and rs238415, was associated with a 1.401-fold increase in pancreatic cancer risk (p < 0.05). We conclude that the polymorphism of XPD Lys751Gln (rs13181) in combination with smoking contributes to increased risk of pancreatic cancer in the Chinese Han population. Haplotype AGG might be a susceptibility haplotype for pancreatic cancer.
format Online
Article
Text
id pubmed-5901508
institution National Center for Biotechnology Information
language English
publishDate 2017
publisher Sociedade Brasileira de Genética
record_format MEDLINE/PubMed
spelling pubmed-59015082018-04-23 Contribution of DNA repair xeroderma pigmentosum group D genotypes to pancreatic cancer risk in the Chinese Han population Yan, Dong Liang, Xiao-Hui Ding, Wei Xu, Xin-Jian Wang, Xi-Yan Genet Mol Biol Human and Medical Genetics This study aimed to determine the association between the polymorphisms and haplotypes in the xeroderma pigmentosum group D (XPD) gene and the risk of pancreatic cancer in the Chinese Han population. SNaPshot was used for genotyping six SNP sites of the XPD gene. Comparisons of the correlations between different genotypes in combination with smoking and the susceptibility to pancreatic cancer were performed. Individual pancreatic cancer risk in patients who carry mutant C alleles (AC, CC, and AC+CC) at rs13181 increased (p < 0.05). Taking non-smoking individuals who carry the AA genotype as a reference, and non-smoking individuals who carry mutant allele C (AC+CC), the risk of pancreatic cancer increased by 3.343 times in individuals who smoked ≥ 20 cigarettes daily, 3.309 times in individuals who smoked ≥ 14 packs per year, 5.011 times in individuals who smoked ≥ 24 packs per year, and 4.013 times in the individuals who smoked ≥ 37 packs per year (P < 0.05). In addition, haplotype analysis revealed that haplotype AGG, which comprised rs13181, rs3916874 and rs238415, was associated with a 1.401-fold increase in pancreatic cancer risk (p < 0.05). We conclude that the polymorphism of XPD Lys751Gln (rs13181) in combination with smoking contributes to increased risk of pancreatic cancer in the Chinese Han population. Haplotype AGG might be a susceptibility haplotype for pancreatic cancer. Sociedade Brasileira de Genética 2017-12-18 2018 /pmc/articles/PMC5901508/ /pubmed/29260835 http://dx.doi.org/10.1590/1678-4685-GMB-2017-0033 Text en Copyright © 2017, Sociedade Brasileira de Genética. https://creativecommons.org/licenses/by/4.0/ License information: This is an open-access article distributed under the terms of the Creative Commons Attribution License (type CC-BY), which permits unrestricted use, distribution and reproduction in any medium, provided the original article is properly cited.
spellingShingle Human and Medical Genetics
Yan, Dong
Liang, Xiao-Hui
Ding, Wei
Xu, Xin-Jian
Wang, Xi-Yan
Contribution of DNA repair xeroderma pigmentosum group D genotypes to pancreatic cancer risk in the Chinese Han population
title Contribution of DNA repair xeroderma pigmentosum group D genotypes to pancreatic cancer risk in the Chinese Han population
title_full Contribution of DNA repair xeroderma pigmentosum group D genotypes to pancreatic cancer risk in the Chinese Han population
title_fullStr Contribution of DNA repair xeroderma pigmentosum group D genotypes to pancreatic cancer risk in the Chinese Han population
title_full_unstemmed Contribution of DNA repair xeroderma pigmentosum group D genotypes to pancreatic cancer risk in the Chinese Han population
title_short Contribution of DNA repair xeroderma pigmentosum group D genotypes to pancreatic cancer risk in the Chinese Han population
title_sort contribution of dna repair xeroderma pigmentosum group d genotypes to pancreatic cancer risk in the chinese han population
topic Human and Medical Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5901508/
https://www.ncbi.nlm.nih.gov/pubmed/29260835
http://dx.doi.org/10.1590/1678-4685-GMB-2017-0033
work_keys_str_mv AT yandong contributionofdnarepairxerodermapigmentosumgroupdgenotypestopancreaticcancerriskinthechinesehanpopulation
AT liangxiaohui contributionofdnarepairxerodermapigmentosumgroupdgenotypestopancreaticcancerriskinthechinesehanpopulation
AT dingwei contributionofdnarepairxerodermapigmentosumgroupdgenotypestopancreaticcancerriskinthechinesehanpopulation
AT xuxinjian contributionofdnarepairxerodermapigmentosumgroupdgenotypestopancreaticcancerriskinthechinesehanpopulation
AT wangxiyan contributionofdnarepairxerodermapigmentosumgroupdgenotypestopancreaticcancerriskinthechinesehanpopulation