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Metaproteogenomic Profiling of Microbial Communities Colonizing Actively Venting Hydrothermal Chimneys

At hydrothermal vent sites, chimneys consisting of sulfides, sulfates, and oxides are formed upon contact of reduced hydrothermal fluids with oxygenated seawater. The walls and surfaces of these chimneys are an important habitat for vent-associated microorganisms. We used community proteogenomics to...

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Autores principales: Pjevac, Petra, Meier, Dimitri V., Markert, Stephanie, Hentschker, Christian, Schweder, Thomas, Becher, Dörte, Gruber-Vodicka, Harald R., Richter, Michael, Bach, Wolfgang, Amann, Rudolf, Meyerdierks, Anke
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5904459/
https://www.ncbi.nlm.nih.gov/pubmed/29696004
http://dx.doi.org/10.3389/fmicb.2018.00680
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author Pjevac, Petra
Meier, Dimitri V.
Markert, Stephanie
Hentschker, Christian
Schweder, Thomas
Becher, Dörte
Gruber-Vodicka, Harald R.
Richter, Michael
Bach, Wolfgang
Amann, Rudolf
Meyerdierks, Anke
author_facet Pjevac, Petra
Meier, Dimitri V.
Markert, Stephanie
Hentschker, Christian
Schweder, Thomas
Becher, Dörte
Gruber-Vodicka, Harald R.
Richter, Michael
Bach, Wolfgang
Amann, Rudolf
Meyerdierks, Anke
author_sort Pjevac, Petra
collection PubMed
description At hydrothermal vent sites, chimneys consisting of sulfides, sulfates, and oxides are formed upon contact of reduced hydrothermal fluids with oxygenated seawater. The walls and surfaces of these chimneys are an important habitat for vent-associated microorganisms. We used community proteogenomics to investigate and compare the composition, metabolic potential and relative in situ protein abundance of microbial communities colonizing two actively venting hydrothermal chimneys from the Manus Basin back-arc spreading center (Papua New Guinea). We identified overlaps in the in situ functional profiles of both chimneys, despite differences in microbial community composition and venting regime. Carbon fixation on both chimneys seems to have been primarily mediated through the reverse tricarboxylic acid cycle and fueled by sulfur-oxidation, while the abundant metabolic potential for hydrogen oxidation and carbon fixation via the Calvin–Benson–Bassham cycle was hardly utilized. Notably, the highly diverse microbial community colonizing the analyzed black smoker chimney had a highly redundant metabolic potential. In contrast, the considerably less diverse community colonizing the diffusely venting chimney displayed a higher metabolic versatility. An increased diversity on the phylogenetic level is thus not directly linked to an increased metabolic diversity in microbial communities that colonize hydrothermal chimneys.
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spelling pubmed-59044592018-04-25 Metaproteogenomic Profiling of Microbial Communities Colonizing Actively Venting Hydrothermal Chimneys Pjevac, Petra Meier, Dimitri V. Markert, Stephanie Hentschker, Christian Schweder, Thomas Becher, Dörte Gruber-Vodicka, Harald R. Richter, Michael Bach, Wolfgang Amann, Rudolf Meyerdierks, Anke Front Microbiol Microbiology At hydrothermal vent sites, chimneys consisting of sulfides, sulfates, and oxides are formed upon contact of reduced hydrothermal fluids with oxygenated seawater. The walls and surfaces of these chimneys are an important habitat for vent-associated microorganisms. We used community proteogenomics to investigate and compare the composition, metabolic potential and relative in situ protein abundance of microbial communities colonizing two actively venting hydrothermal chimneys from the Manus Basin back-arc spreading center (Papua New Guinea). We identified overlaps in the in situ functional profiles of both chimneys, despite differences in microbial community composition and venting regime. Carbon fixation on both chimneys seems to have been primarily mediated through the reverse tricarboxylic acid cycle and fueled by sulfur-oxidation, while the abundant metabolic potential for hydrogen oxidation and carbon fixation via the Calvin–Benson–Bassham cycle was hardly utilized. Notably, the highly diverse microbial community colonizing the analyzed black smoker chimney had a highly redundant metabolic potential. In contrast, the considerably less diverse community colonizing the diffusely venting chimney displayed a higher metabolic versatility. An increased diversity on the phylogenetic level is thus not directly linked to an increased metabolic diversity in microbial communities that colonize hydrothermal chimneys. Frontiers Media S.A. 2018-04-06 /pmc/articles/PMC5904459/ /pubmed/29696004 http://dx.doi.org/10.3389/fmicb.2018.00680 Text en Copyright © 2018 Pjevac, Meier, Markert, Hentschker, Schweder, Becher, Gruber-Vodicka, Richter, Bach, Amann and Meyerdierks. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Pjevac, Petra
Meier, Dimitri V.
Markert, Stephanie
Hentschker, Christian
Schweder, Thomas
Becher, Dörte
Gruber-Vodicka, Harald R.
Richter, Michael
Bach, Wolfgang
Amann, Rudolf
Meyerdierks, Anke
Metaproteogenomic Profiling of Microbial Communities Colonizing Actively Venting Hydrothermal Chimneys
title Metaproteogenomic Profiling of Microbial Communities Colonizing Actively Venting Hydrothermal Chimneys
title_full Metaproteogenomic Profiling of Microbial Communities Colonizing Actively Venting Hydrothermal Chimneys
title_fullStr Metaproteogenomic Profiling of Microbial Communities Colonizing Actively Venting Hydrothermal Chimneys
title_full_unstemmed Metaproteogenomic Profiling of Microbial Communities Colonizing Actively Venting Hydrothermal Chimneys
title_short Metaproteogenomic Profiling of Microbial Communities Colonizing Actively Venting Hydrothermal Chimneys
title_sort metaproteogenomic profiling of microbial communities colonizing actively venting hydrothermal chimneys
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5904459/
https://www.ncbi.nlm.nih.gov/pubmed/29696004
http://dx.doi.org/10.3389/fmicb.2018.00680
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