Cargando…

SciRide Finder: a citation-based paradigm in biomedical literature search

There are more than 26 million peer-reviewed biomedical research items according to Medline/PubMed. This breadth of information is indicative of the progress in biomedical sciences on one hand, but an overload for scientists performing literature searches on the other. A major portion of scientific...

Descripción completa

Detalles Bibliográficos
Autores principales: Volanakis, Adam, Krawczyk, Konrad
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5906646/
https://www.ncbi.nlm.nih.gov/pubmed/29670147
http://dx.doi.org/10.1038/s41598-018-24571-0
_version_ 1783315416510103552
author Volanakis, Adam
Krawczyk, Konrad
author_facet Volanakis, Adam
Krawczyk, Konrad
author_sort Volanakis, Adam
collection PubMed
description There are more than 26 million peer-reviewed biomedical research items according to Medline/PubMed. This breadth of information is indicative of the progress in biomedical sciences on one hand, but an overload for scientists performing literature searches on the other. A major portion of scientific literature search is to find statements, numbers and protocols that can be cited to build an evidence-based narrative for a new manuscript. Because science builds on prior knowledge, such information has likely been written out and cited in an older manuscript. Thus, Cited Statements, pieces of text from scientific literature supported by citing other peer-reviewed publications, carry significant amount of condensed information on prior art. Based on this principle, we propose a literature search service, SciRide Finder (finder.sciride.org), which constrains the search corpus to such Cited Statements only. We demonstrate that Cited Statements can carry different information to this found in titles/abstracts and full text, giving access to alternative literature search results than traditional search engines. We further show how presenting search results as a list of Cited Statements allows researchers to easily find information to build an evidence-based narrative for their own manuscripts.
format Online
Article
Text
id pubmed-5906646
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-59066462018-04-30 SciRide Finder: a citation-based paradigm in biomedical literature search Volanakis, Adam Krawczyk, Konrad Sci Rep Article There are more than 26 million peer-reviewed biomedical research items according to Medline/PubMed. This breadth of information is indicative of the progress in biomedical sciences on one hand, but an overload for scientists performing literature searches on the other. A major portion of scientific literature search is to find statements, numbers and protocols that can be cited to build an evidence-based narrative for a new manuscript. Because science builds on prior knowledge, such information has likely been written out and cited in an older manuscript. Thus, Cited Statements, pieces of text from scientific literature supported by citing other peer-reviewed publications, carry significant amount of condensed information on prior art. Based on this principle, we propose a literature search service, SciRide Finder (finder.sciride.org), which constrains the search corpus to such Cited Statements only. We demonstrate that Cited Statements can carry different information to this found in titles/abstracts and full text, giving access to alternative literature search results than traditional search engines. We further show how presenting search results as a list of Cited Statements allows researchers to easily find information to build an evidence-based narrative for their own manuscripts. Nature Publishing Group UK 2018-04-18 /pmc/articles/PMC5906646/ /pubmed/29670147 http://dx.doi.org/10.1038/s41598-018-24571-0 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Volanakis, Adam
Krawczyk, Konrad
SciRide Finder: a citation-based paradigm in biomedical literature search
title SciRide Finder: a citation-based paradigm in biomedical literature search
title_full SciRide Finder: a citation-based paradigm in biomedical literature search
title_fullStr SciRide Finder: a citation-based paradigm in biomedical literature search
title_full_unstemmed SciRide Finder: a citation-based paradigm in biomedical literature search
title_short SciRide Finder: a citation-based paradigm in biomedical literature search
title_sort sciride finder: a citation-based paradigm in biomedical literature search
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5906646/
https://www.ncbi.nlm.nih.gov/pubmed/29670147
http://dx.doi.org/10.1038/s41598-018-24571-0
work_keys_str_mv AT volanakisadam sciridefinderacitationbasedparadigminbiomedicalliteraturesearch
AT krawczykkonrad sciridefinderacitationbasedparadigminbiomedicalliteraturesearch