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Enhancing Reuse of Data and Biological Material in Medical Research: From FAIR to FAIR-Health

The known challenge of underutilization of data and biological material from biorepositories as potential resources for medical research has been the focus of discussion for over a decade. Recently developed guidelines for improved data availability and reusability—entitled FAIR Principles (Findabil...

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Autores principales: Holub, Petr, Kohlmayer, Florian, Prasser, Fabian, Mayrhofer, Michaela Th., Schlünder, Irene, Martin, Gillian M., Casati, Sara, Koumakis, Lefteris, Wutte, Andrea, Kozera, Łukasz, Strapagiel, Dominik, Anton, Gabriele, Zanetti, Gianluigi, Sezerman, Osman Ugur, Mendy, Maimuna, Valík, Dalibor, Lavitrano, Marialuisa, Dagher, Georges, Zatloukal, Kurt, van Ommen, GertJan B., Litton, Jan-Eric
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Mary Ann Liebert, Inc. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5906729/
https://www.ncbi.nlm.nih.gov/pubmed/29359962
http://dx.doi.org/10.1089/bio.2017.0110
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author Holub, Petr
Kohlmayer, Florian
Prasser, Fabian
Mayrhofer, Michaela Th.
Schlünder, Irene
Martin, Gillian M.
Casati, Sara
Koumakis, Lefteris
Wutte, Andrea
Kozera, Łukasz
Strapagiel, Dominik
Anton, Gabriele
Zanetti, Gianluigi
Sezerman, Osman Ugur
Mendy, Maimuna
Valík, Dalibor
Lavitrano, Marialuisa
Dagher, Georges
Zatloukal, Kurt
van Ommen, GertJan B.
Litton, Jan-Eric
author_facet Holub, Petr
Kohlmayer, Florian
Prasser, Fabian
Mayrhofer, Michaela Th.
Schlünder, Irene
Martin, Gillian M.
Casati, Sara
Koumakis, Lefteris
Wutte, Andrea
Kozera, Łukasz
Strapagiel, Dominik
Anton, Gabriele
Zanetti, Gianluigi
Sezerman, Osman Ugur
Mendy, Maimuna
Valík, Dalibor
Lavitrano, Marialuisa
Dagher, Georges
Zatloukal, Kurt
van Ommen, GertJan B.
Litton, Jan-Eric
author_sort Holub, Petr
collection PubMed
description The known challenge of underutilization of data and biological material from biorepositories as potential resources for medical research has been the focus of discussion for over a decade. Recently developed guidelines for improved data availability and reusability—entitled FAIR Principles (Findability, Accessibility, Interoperability, and Reusability)—are likely to address only parts of the problem. In this article, we argue that biological material and data should be viewed as a unified resource. This approach would facilitate access to complete provenance information, which is a prerequisite for reproducibility and meaningful integration of the data. A unified view also allows for optimization of long-term storage strategies, as demonstrated in the case of biobanks. We propose an extension of the FAIR Principles to include the following additional components: (1) quality aspects related to research reproducibility and meaningful reuse of the data, (2) incentives to stimulate effective enrichment of data sets and biological material collections and its reuse on all levels, and (3) privacy-respecting approaches for working with the human material and data. These FAIR-Health principles should then be applied to both the biological material and data. We also propose the development of common guidelines for cloud architectures, due to the unprecedented growth of volume and breadth of medical data generation, as well as the associated need to process the data efficiently.
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spelling pubmed-59067292018-04-19 Enhancing Reuse of Data and Biological Material in Medical Research: From FAIR to FAIR-Health Holub, Petr Kohlmayer, Florian Prasser, Fabian Mayrhofer, Michaela Th. Schlünder, Irene Martin, Gillian M. Casati, Sara Koumakis, Lefteris Wutte, Andrea Kozera, Łukasz Strapagiel, Dominik Anton, Gabriele Zanetti, Gianluigi Sezerman, Osman Ugur Mendy, Maimuna Valík, Dalibor Lavitrano, Marialuisa Dagher, Georges Zatloukal, Kurt van Ommen, GertJan B. Litton, Jan-Eric Biopreserv Biobank Original Articles The known challenge of underutilization of data and biological material from biorepositories as potential resources for medical research has been the focus of discussion for over a decade. Recently developed guidelines for improved data availability and reusability—entitled FAIR Principles (Findability, Accessibility, Interoperability, and Reusability)—are likely to address only parts of the problem. In this article, we argue that biological material and data should be viewed as a unified resource. This approach would facilitate access to complete provenance information, which is a prerequisite for reproducibility and meaningful integration of the data. A unified view also allows for optimization of long-term storage strategies, as demonstrated in the case of biobanks. We propose an extension of the FAIR Principles to include the following additional components: (1) quality aspects related to research reproducibility and meaningful reuse of the data, (2) incentives to stimulate effective enrichment of data sets and biological material collections and its reuse on all levels, and (3) privacy-respecting approaches for working with the human material and data. These FAIR-Health principles should then be applied to both the biological material and data. We also propose the development of common guidelines for cloud architectures, due to the unprecedented growth of volume and breadth of medical data generation, as well as the associated need to process the data efficiently. Mary Ann Liebert, Inc. 2018-04-01 2018-04-01 /pmc/articles/PMC5906729/ /pubmed/29359962 http://dx.doi.org/10.1089/bio.2017.0110 Text en © Petr Holub et al., 2018; Published by Mary Ann Liebert, Inc. This Open Access article is distributed under the terms of the Creative Commons License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Holub, Petr
Kohlmayer, Florian
Prasser, Fabian
Mayrhofer, Michaela Th.
Schlünder, Irene
Martin, Gillian M.
Casati, Sara
Koumakis, Lefteris
Wutte, Andrea
Kozera, Łukasz
Strapagiel, Dominik
Anton, Gabriele
Zanetti, Gianluigi
Sezerman, Osman Ugur
Mendy, Maimuna
Valík, Dalibor
Lavitrano, Marialuisa
Dagher, Georges
Zatloukal, Kurt
van Ommen, GertJan B.
Litton, Jan-Eric
Enhancing Reuse of Data and Biological Material in Medical Research: From FAIR to FAIR-Health
title Enhancing Reuse of Data and Biological Material in Medical Research: From FAIR to FAIR-Health
title_full Enhancing Reuse of Data and Biological Material in Medical Research: From FAIR to FAIR-Health
title_fullStr Enhancing Reuse of Data and Biological Material in Medical Research: From FAIR to FAIR-Health
title_full_unstemmed Enhancing Reuse of Data and Biological Material in Medical Research: From FAIR to FAIR-Health
title_short Enhancing Reuse of Data and Biological Material in Medical Research: From FAIR to FAIR-Health
title_sort enhancing reuse of data and biological material in medical research: from fair to fair-health
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5906729/
https://www.ncbi.nlm.nih.gov/pubmed/29359962
http://dx.doi.org/10.1089/bio.2017.0110
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