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Automatic infection detection based on electronic medical records

BACKGROUND: Making accurate patient care decision, as early as possible, is a constant challenge, especially for physicians in the emergency department. The increasing volumes of electronic medical records (EMRs) open new horizons for automatic diagnosis. In this paper, we propose to use machine lea...

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Autores principales: Tou, Huaixiao, Yao, Lu, Wei, Zhongyu, Zhuang, Xiahai, Zhang, Bo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5907141/
https://www.ncbi.nlm.nih.gov/pubmed/29671399
http://dx.doi.org/10.1186/s12859-018-2101-x
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author Tou, Huaixiao
Yao, Lu
Wei, Zhongyu
Zhuang, Xiahai
Zhang, Bo
author_facet Tou, Huaixiao
Yao, Lu
Wei, Zhongyu
Zhuang, Xiahai
Zhang, Bo
author_sort Tou, Huaixiao
collection PubMed
description BACKGROUND: Making accurate patient care decision, as early as possible, is a constant challenge, especially for physicians in the emergency department. The increasing volumes of electronic medical records (EMRs) open new horizons for automatic diagnosis. In this paper, we propose to use machine learning approaches for automatic infection detection based on EMRs. Five categories of information are utilized for prediction, including personal information, admission note, vital signs, diagnose test results and medical image diagnose. RESULTS: Experimental results on a newly constructed EMRs dataset from emergency department show that machine learning models can achieve a decent performance for infection detection with area under the receiver operator characteristic curve (AUC) of 0.88. Out of all the five types of information, admission note in text form makes the most contribution with the AUC of 0.87. CONCLUSIONS: This study provides a state-of-the-art EMRs processing system to automatically make medical decisions. It extracts five types of features associated with infection and achieves a decent performance on automatic infection detection based on machine learning models.
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spelling pubmed-59071412018-04-30 Automatic infection detection based on electronic medical records Tou, Huaixiao Yao, Lu Wei, Zhongyu Zhuang, Xiahai Zhang, Bo BMC Bioinformatics Research BACKGROUND: Making accurate patient care decision, as early as possible, is a constant challenge, especially for physicians in the emergency department. The increasing volumes of electronic medical records (EMRs) open new horizons for automatic diagnosis. In this paper, we propose to use machine learning approaches for automatic infection detection based on EMRs. Five categories of information are utilized for prediction, including personal information, admission note, vital signs, diagnose test results and medical image diagnose. RESULTS: Experimental results on a newly constructed EMRs dataset from emergency department show that machine learning models can achieve a decent performance for infection detection with area under the receiver operator characteristic curve (AUC) of 0.88. Out of all the five types of information, admission note in text form makes the most contribution with the AUC of 0.87. CONCLUSIONS: This study provides a state-of-the-art EMRs processing system to automatically make medical decisions. It extracts five types of features associated with infection and achieves a decent performance on automatic infection detection based on machine learning models. BioMed Central 2018-04-11 /pmc/articles/PMC5907141/ /pubmed/29671399 http://dx.doi.org/10.1186/s12859-018-2101-x Text en © The Author(s) 2018 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research
Tou, Huaixiao
Yao, Lu
Wei, Zhongyu
Zhuang, Xiahai
Zhang, Bo
Automatic infection detection based on electronic medical records
title Automatic infection detection based on electronic medical records
title_full Automatic infection detection based on electronic medical records
title_fullStr Automatic infection detection based on electronic medical records
title_full_unstemmed Automatic infection detection based on electronic medical records
title_short Automatic infection detection based on electronic medical records
title_sort automatic infection detection based on electronic medical records
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5907141/
https://www.ncbi.nlm.nih.gov/pubmed/29671399
http://dx.doi.org/10.1186/s12859-018-2101-x
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