Cargando…

ncRNA-disease association prediction based on sequence information and tripartite network

BACKGROUND: Current technology has demonstrated that mutation and deregulation of non-coding RNAs (ncRNAs) are associated with diverse human diseases and important biological processes. Therefore, developing a novel computational method for predicting potential ncRNA-disease associations could benef...

Descripción completa

Detalles Bibliográficos
Autores principales:	Mori, Takuya, Ngouv, Hayliang, Hayashida, Morihiro, Akutsu, Tatsuya, Nacher, Jose C.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2018
Materias:	Research
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5907179/ https://www.ncbi.nlm.nih.gov/pubmed/29671405 http://dx.doi.org/10.1186/s12918-018-0527-4

Ejemplares similares

ncPred: ncRNA-Disease Association Prediction through Tripartite Network-Based Inference
por: Alaimo, Salvatore, et al.
Publicado: (2014)

Mammalian ncRNA-disease repository: a global view of ncRNA-mediated disease network
por: Wang, Y, et al.
Publicado: (2013)

Adjacent Nucleotide Dependence in ncRNA and Order-1 SCFG for ncRNA Identification
por: Wong, Thomas K. F., et al.
Publicado: (2010)

RNAcentral: an international database of ncRNA sequences
Publicado: (2015)

A Keystone for ncRNA
por: Hacisuleyman, Ezgi, et al.
Publicado: (2012)

RPI-Pred: predicting ncRNA-protein interaction using sequence and structural information
por: Suresh, V., et al.
Publicado: (2015)

Accurate Prediction of ncRNA-Protein Interactions From the Integration of Sequence and Evolutionary Information
por: Zhan, Zhao-Hui, et al.
Publicado: (2018)

Critical association of ncRNA with introns
por: Rearick, David, et al.
Publicado: (2011)

Chromatin-associated ncRNA activities
por: Keller, Claudia, et al.
Publicado: (2013)

ncRNA orthologies in the vertebrate lineage
por: Pignatelli, Miguel, et al.
Publicado: (2016)

Mammalian Mitochondrial ncRNA Database
por: Anandakumar, Shanmugam, et al.
Publicado: (2015)

Bioinformatic Tools for the Analysis and Prediction of ncRNA Interactions
por: Rincón-Riveros, Andrés, et al.
Publicado: (2021)

Evolutionary conservation and functional roles of ncRNA
por: Qu, Zhipeng, et al.
Publicado: (2012)

ncRNA transcription makes its mark
por: Hartzog, Grant A, et al.
Publicado: (2009)

Regulatory Roles for Long ncRNA and mRNA
por: Karapetyan, Armen R., et al.
Publicado: (2013)

BGFE: A Deep Learning Model for ncRNA-Protein Interaction Predictions Based on Improved Sequence Information
por: Zhan, Zhao-Hui, et al.
Publicado: (2019)

High-Accuracy ncRNA Function Prediction via Deep Learning Using Global and Local Sequence Information
por: Orro, Alessandro, et al.
Publicado: (2023)

Computational Approaches for the Analysis of ncRNA through Deep Sequencing Techniques
por: Veneziano, Dario, et al.
Publicado: (2015)

Network regulatory mechanism of ncRNA on the Wnt signaling pathway in osteoporosis
por: An, Fangyu, et al.
Publicado: (2023)

MUC14-Related ncRNA-mRNA Network in Breast Cancer
por: Wang, Shuqian, et al.
Publicado: (2021)

Construction of Complex Features for Computational Predicting ncRNA-Protein Interaction
por: Dai, Qiguo, et al.
Publicado: (2019)

Efficient known ncRNA search including pseudoknots
por: Yuan, Cheng, et al.
Publicado: (2013)

Unveiling ncRNA regulatory axes in atherosclerosis progression
por: Navarro, Estanislao, et al.
Publicado: (2020)

RPI-SE: a stacking ensemble learning framework for ncRNA-protein interactions prediction using sequence information
por: Yi, Hai-Cheng, et al.
Publicado: (2020)

SAWRPI: A Stacking Ensemble Framework With Adaptive Weight for Predicting ncRNA-Protein Interactions Using Sequence Information
por: Ren, Zhong-Hao, et al.
Publicado: (2022)

RNA Methylation in ncRNA: Classes, Detection, and Molecular Associations
por: Romano, Giulia, et al.
Publicado: (2018)

Bioinformatics of Cancer ncRNA in High Throughput Sequencing: Present State and Challenges
por: Jorge, Natasha Andressa Nogueira, et al.
Publicado: (2012)

Identification and characterization of ncRNA-associated ceRNA networks in Arabidopsis leaf development
por: Meng, Xianwen, et al.
Publicado: (2018)

ProbeAlign: incorporating high-throughput sequencing-based structure probing information into ncRNA homology search
por: Ge, Ping, et al.
Publicado: (2014)

Identification and classification of ncRNA molecules using graph properties
por: Childs, Liam, et al.
Publicado: (2009)

Long ncRNA expression associates with tissue-specific enhancers
por: Vučićević, Dubravka, et al.
Publicado: (2015)

Regulation of Pyroptosis by ncRNA: A Novel Research Direction
por: Gao, Liyuan, et al.
Publicado: (2022)

A multi-network integration approach for measuring disease similarity based on ncRNA regulation and heterogeneous information
por: Zhang, Ningyi, et al.
Publicado: (2022)

DARIO: a ncRNA detection and analysis tool for next-generation sequencing experiments
por: Fasold, Mario, et al.
Publicado: (2011)

Identification of ncRNAs as potential therapeutic targets in multiple sclerosis through differential ncRNA – mRNA network analysis
por: Irizar, Haritz, et al.
Publicado: (2015)

A Deep Learning Framework for Robust and Accurate Prediction of ncRNA-Protein Interactions Using Evolutionary Information
por: Yi, Hai-Cheng, et al.
Publicado: (2018)

NfiR, a New Regulatory Noncoding RNA (ncRNA), Is Required in Concert with the NfiS ncRNA for Optimal Expression of Nitrogenase Genes in Pseudomonas stutzeri A1501
por: Zhan, Yuhua, et al.
Publicado: (2019)

RPITER: A Hierarchical Deep Learning Framework for ncRNA–Protein Interaction Prediction
por: Peng, Cheng, et al.
Publicado: (2019)

NPInter v2.0: an updated database of ncRNA interactions
por: Yuan, Jiao, et al.
Publicado: (2014)

NPInter v4.0: an integrated database of ncRNA interactions
por: Teng, Xueyi, et al.
Publicado: (2020)

Cannot write session to /tmp/vufind_sessions/sess_ruajs0guj8mtk5dgtehvo2ic7g