Cargando…

Rule-Out Outbreak: 24-Hour Metagenomic Next-Generation Sequencing for Characterizing Respiratory Virus Source for Infection Prevention

BACKGROUND. Metagenomic next-generation sequencing (mNGS) has been used to uncover unusual causes of infectious diseases but has not been used routinely for the investigation of putative nosocomial outbreaks. Here, we describe the use of mNGS during investigation of a cluster of human rhinovirus (HR...

Descripción completa

Detalles Bibliográficos
Autores principales:	Greninger, Alexander L., Waghmare, Alpana, Adler, Amanda, Qin, Xuan, Crowley, Janet L., Englund, Janet A., Kuypers, Jane M., Jerome, Keith R., Zerr, Danielle M.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2017
Materias:	Original Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5907853/ https://www.ncbi.nlm.nih.gov/pubmed/28379561 http://dx.doi.org/10.1093/jpids/pix019

Ejemplares similares

Rapid Metagenomic Next-Generation Sequencing during an Investigation of Hospital-Acquired Human Parainfluenza Virus 3 Infections
por: Greninger, Alexander L., et al.
Publicado: (2016)

Prospective, Real-time Metagenomic Sequencing During Norovirus Outbreak Reveals Discrete Transmission Clusters
por: Casto, Amanda M, et al.
Publicado: (2019)

1734. Cytokine Levels in Bronchoalveolar Lavage Fluid of Rhinovirus-Infected Hematopoietic Cell Transplant Recipients: Associations With Mortality
por: Waghmare, Alpana, et al.
Publicado: (2018)

Respiratory viruses
por: Waghmare, Alpana, et al.
Publicado: (2021)

1647. Real-Time Metagenomic Sequencing Reveals Discrete Transmission Clusters Within a Hospital-Associated Norovirus Outbreak
por: Casto, Amanda, et al.
Publicado: (2018)

Human Rhinovirus Infections in Hematopoietic Cell Transplant Recipients: Risk Score for Progression to Lower Respiratory Tract Infection
por: Waghmare, Alpana, et al.
Publicado: (2019)

Prolonged Shedding of Human Coronavirus in Hematopoietic Cell Transplant Recipients: Risk Factors and Viral Genome Evolution
por: Ogimi, Chikara, et al.
Publicado: (2017)

Successful Treatment of Parainfluenza Virus Respiratory Tract Infection With DAS181 in 4 Immunocompromised Children
por: Waghmare, Alpana, et al.
Publicado: (2015)

Respiratory Syncytial Virus Lower Respiratory Disease in Hematopoietic Cell Transplant Recipients: Viral RNA Detection in Blood, Antiviral Treatment, and Clinical Outcomes
por: Waghmare, Alpana, et al.
Publicado: (2013)

1756. Role of Human bocavirus Respiratory Tract Infection in Hematopoietic Cell Transplant Recipients
por: Ogimi, Chikara, et al.
Publicado: (2019)

Initial High Viral Load Is Associated with Prolonged Shedding of Human Rhinovirus in Allogeneic Hematopoietic Cell Transplant Recipients
por: Ogimi, Chikara, et al.
Publicado: (2018)

Clinical Significance of Human Coronavirus in Bronchoalveolar Lavage Samples From Hematopoietic Cell Transplantation Recipients and Hematologic Malignancy Patients
por: Ogimi, Chikara, et al.
Publicado: (2016)

Within-host rhinovirus evolution in upper and lower respiratory tract highlights capsid variability and mutation-independent compartmentalization
por: Makhsous, Negar, et al.
Publicado: (2023)

Multiple viral respiratory pathogens in children with bronchiolitis
por: Stempel, Hilary E, et al.
Publicado: (2008)

Enterovirus D‐68 in children presenting for acute care in the hospital setting
por: Savage, Timothy J., et al.
Publicado: (2018)

750. Respiratory Virus Infections and Airflow Obstruction After Allogeneic Hematopoietic Cell Transplantation
por: Boeckh, Michael, et al.
Publicado: (2018)

Impact of Respiratory Virus Infection before Hematopoietic Cell Transplantation (HCT) on Post-Transplant Outcomes in Adults in the PCR Era: Do Rhinovirus and Coronavirus Infections Matter?
por: Kim, Yae-Jean, et al.
Publicado: (2017)

Impact of Pretransplant Respiratory Virus Detection through Universal Screening in Children Undergoing Hematopoietic Cell Transplantation (HCT)
por: Kim, Yae-Jean, et al.
Publicado: (2017)

Respiratory Syncytial Virus in Hematopoietic Cell Transplant Recipients: Factors Determining Progression to Lower Respiratory Tract Disease
por: Kim, Yae-Jean, et al.
Publicado: (2014)

871. Symptomatic Respiratory Syncytial Virus and Adenovirus Upper Respiratory Tract Infections Increase the Risk of Invasive Aspergillosis After Allogeneic Hematopoietic Cell Transplantation
por: Ogimi, Chikara, et al.
Publicado: (2018)

Clinical Significance of Human Coronavirus in Bronchoalveolar Lavage Samples From Hematopoietic Cell Transplant Recipients and Patients With Hematologic Malignancies
por: Ogimi, Chikara, et al.
Publicado: (2017)

Characteristics and Outcomes of Coronavirus Infection in Children: The Role of Viral Factors and an Immunocompromised State
por: Ogimi, Chikara, et al.
Publicado: (2018)

2626. Rhinovirus in Children Presenting to the Emergency Department: Role of Viral Load in Disease Severity and Co-Infections
por: Waghmare, Alpana, et al.
Publicado: (2019)

Out of the blue: a 24-hour skywatcher's guide
por: Naylor, John
Publicado: (2002)

923. Respiratory Syncytial and Parainfluenza Virus Infection Increase the Risk of Cytomegalovirus Reactivation in Allogeneic Hematopoietic Cell Transplant Recipients
por: Xie, Hu, et al.
Publicado: (2021)

Frequent and Prolonged Shedding of Bocavirus in Young Children Attending Daycare
por: Martin, Emily T., et al.
Publicado: (2010)

Infectious Complications Following CD19 Chimeric Antigen Receptor T-cell Therapy for Children, Adolescents, and Young Adults
por: Vora, Surabhi B, et al.
Publicado: (2020)

Human rhinovirus detection in the lower respiratory tract of hematopoietic cell transplant recipients: association with mortality
por: Seo, Sachiko, et al.
Publicado: (2017)

Comparison of FilmArray Respiratory Panel and laboratory-developed real-time reverse transcription–polymerase chain reaction assays for respiratory virus detection()()
por: Renaud, Christian, et al.
Publicado: (2012)

Risk factors for seasonal human coronavirus lower respiratory tract infection after hematopoietic cell transplantation
por: Ogimi, Chikara, et al.
Publicado: (2021)

Novel factors to predict respiratory viral disease progression in allogeneic hematopoietic cell transplant recipients
por: Ogimi, Chikara, et al.
Publicado: (2022)

Evaluating addition of self-collected throat swabs to nasal swabs for respiratory virus detection
por: Fisher, Cynthia E., et al.
Publicado: (2019)

Shedding of Pandemic (H1N1) 2009 Virus among Health Care Personnel, Seattle, Washington, USA
por: Kay, Meagan, et al.
Publicado: (2011)

Early Respiratory Viral Acquisition after Allogeneic Hematopoietic Cell Transplant (HCT)
por: Boonyaratanakornkit, Jim, et al.
Publicado: (2019)

Sams teach yourself Go in 24 hours: next generation systems programming with Golang
por: Ornbo, George
Publicado: (2018)

Comparison of molecular detection methods for pertussis in children during a state-wide outbreak
por: Qin, X., et al.
Publicado: (2016)

Assessing the Potential Impact of the BioSense 24-hour Rule Using NC DETECT ED Data
por: Ising, Amy, et al.
Publicado: (2015)

A decade of RNA virus metagenomics is (not) enough
por: Greninger, Alexander L.
Publicado: (2018)

Metagenomic Next-Generation Sequencing of the 2014 Ebola Virus Disease Outbreak in the Democratic Republic of the Congo
por: Li, Tony, et al.
Publicado: (2019)

Multiple versus single virus respiratory infections: viral load and clinical disease severity in hospitalized children
por: Martin, Emily T., et al.
Publicado: (2011)

Cannot write session to /tmp/vufind_sessions/sess_8das1dit8f0gh7rot0141u7tft