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Competitive docking model for prediction of the human nicotinic acetylcholine receptor α7 binding of tobacco constituents
The detrimental health effects associated with tobacco use constitute a major public health concern. The addiction associated with nicotine found in tobacco products has led to difficulty in quitting among users. Nicotinic acetylcholine receptors (nAChRs) are the targets of nicotine and are responsi...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals LLC
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5908294/ https://www.ncbi.nlm.nih.gov/pubmed/29682193 http://dx.doi.org/10.18632/oncotarget.24458 |
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author | Ng, Hui Wen Leggett, Carmine Sakkiah, Sugunadevi Pan, Bohu Ye, Hao Wu, Leihong Selvaraj, Chandrabose Tong, Weida Hong, Huixiao |
author_facet | Ng, Hui Wen Leggett, Carmine Sakkiah, Sugunadevi Pan, Bohu Ye, Hao Wu, Leihong Selvaraj, Chandrabose Tong, Weida Hong, Huixiao |
author_sort | Ng, Hui Wen |
collection | PubMed |
description | The detrimental health effects associated with tobacco use constitute a major public health concern. The addiction associated with nicotine found in tobacco products has led to difficulty in quitting among users. Nicotinic acetylcholine receptors (nAChRs) are the targets of nicotine and are responsible for addiction to tobacco products. However, it is unknown if the other >8000 tobacco constituents are addictive. Since it is time-consuming and costly to experimentally assess addictive potential of such larger number of chemicals, computationally predicting human nAChRs binding is important for in silico evaluation of addiction potential of tobacco constituents and needs structures of human nAChRs. Therefore, we constructed three-dimensional structures of the ligand binding domain of human nAChR α7 subtype and then developed a predictive model based on the constructed structures to predict human nAChR α7 binding activity of tobacco constituents. The predictive model correctly predicted 11 out of 12 test compounds to be binders of nAChR α7. The model is a useful tool for high-throughput screening of potential addictive tobacco constituents. These results could inform regulatory science research by providing a new validated predictive tool using cutting-edge computational methodology to high-throughput screen tobacco additives and constituents for their binding interaction with the human α7 nicotinic receptor. The tool represents a prediction model capable of screening thousands of chemicals found in tobacco products for addiction potential, which improves the understanding of the potential effects of additives. |
format | Online Article Text |
id | pubmed-5908294 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Impact Journals LLC |
record_format | MEDLINE/PubMed |
spelling | pubmed-59082942018-04-20 Competitive docking model for prediction of the human nicotinic acetylcholine receptor α7 binding of tobacco constituents Ng, Hui Wen Leggett, Carmine Sakkiah, Sugunadevi Pan, Bohu Ye, Hao Wu, Leihong Selvaraj, Chandrabose Tong, Weida Hong, Huixiao Oncotarget Research Paper The detrimental health effects associated with tobacco use constitute a major public health concern. The addiction associated with nicotine found in tobacco products has led to difficulty in quitting among users. Nicotinic acetylcholine receptors (nAChRs) are the targets of nicotine and are responsible for addiction to tobacco products. However, it is unknown if the other >8000 tobacco constituents are addictive. Since it is time-consuming and costly to experimentally assess addictive potential of such larger number of chemicals, computationally predicting human nAChRs binding is important for in silico evaluation of addiction potential of tobacco constituents and needs structures of human nAChRs. Therefore, we constructed three-dimensional structures of the ligand binding domain of human nAChR α7 subtype and then developed a predictive model based on the constructed structures to predict human nAChR α7 binding activity of tobacco constituents. The predictive model correctly predicted 11 out of 12 test compounds to be binders of nAChR α7. The model is a useful tool for high-throughput screening of potential addictive tobacco constituents. These results could inform regulatory science research by providing a new validated predictive tool using cutting-edge computational methodology to high-throughput screen tobacco additives and constituents for their binding interaction with the human α7 nicotinic receptor. The tool represents a prediction model capable of screening thousands of chemicals found in tobacco products for addiction potential, which improves the understanding of the potential effects of additives. Impact Journals LLC 2018-02-08 /pmc/articles/PMC5908294/ /pubmed/29682193 http://dx.doi.org/10.18632/oncotarget.24458 Text en Copyright: © 2018 Ng et al. http://creativecommons.org/licenses/by/3.0/ This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/) (CC-BY), which permits unrestricted use and redistribution provided that the original author and source are credited. |
spellingShingle | Research Paper Ng, Hui Wen Leggett, Carmine Sakkiah, Sugunadevi Pan, Bohu Ye, Hao Wu, Leihong Selvaraj, Chandrabose Tong, Weida Hong, Huixiao Competitive docking model for prediction of the human nicotinic acetylcholine receptor α7 binding of tobacco constituents |
title | Competitive docking model for prediction of the human nicotinic acetylcholine receptor α7 binding of tobacco constituents |
title_full | Competitive docking model for prediction of the human nicotinic acetylcholine receptor α7 binding of tobacco constituents |
title_fullStr | Competitive docking model for prediction of the human nicotinic acetylcholine receptor α7 binding of tobacco constituents |
title_full_unstemmed | Competitive docking model for prediction of the human nicotinic acetylcholine receptor α7 binding of tobacco constituents |
title_short | Competitive docking model for prediction of the human nicotinic acetylcholine receptor α7 binding of tobacco constituents |
title_sort | competitive docking model for prediction of the human nicotinic acetylcholine receptor α7 binding of tobacco constituents |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5908294/ https://www.ncbi.nlm.nih.gov/pubmed/29682193 http://dx.doi.org/10.18632/oncotarget.24458 |
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