Cargando…
Indel detection from DNA and RNA sequencing data with transIndel
BACKGROUND: Insertions and deletions (indels) are a major class of genomic variation associated with human disease. Indels are primarily detected from DNA sequencing (DNA-seq) data but their transcriptional consequences remain unexplored due to challenges in discriminating medium-sized and large ind...
Autores principales: | Yang, Rendong, Van Etten, Jamie L., Dehm, Scott M. |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5909256/ https://www.ncbi.nlm.nih.gov/pubmed/29673323 http://dx.doi.org/10.1186/s12864-018-4671-4 |
Ejemplares similares
-
An integrated package for bisulfite DNA methylation data analysis with Indel-sensitive mapping
por: Zhou, Qiangwei, et al.
Publicado: (2019) -
Filtering de novo indels in parent-offspring trios
por: Liu, Yongzhuang, et al.
Publicado: (2020) -
ProPIP: a tool for progressive multiple sequence alignment with Poisson Indel Process
por: Maiolo, Massimo, et al.
Publicado: (2021) -
DiSNPindel: improved intra-individual SNP and InDel detection in direct amplicon sequencing of a diploid
por: Deng, Jizhong, et al.
Publicado: (2015) -
ScanIndel: a hybrid framework for indel detection via gapped alignment, split reads and de novo assembly
por: Yang, Rendong, et al.
Publicado: (2015)