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A new diagnostic tool for rapid and accurate detection of Mycobacterium tuberculosis
Mycobacterium tuberculosis, acid fast bacilli from the family of Mycobacteriaceae, is the causative agent of most cases of tuberculosis. Tuberculosis, as a communicable disease, remains a serious public health threat, killing more than one million people globally every year. Primary diagnosis of tub...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5910638/ https://www.ncbi.nlm.nih.gov/pubmed/29686505 http://dx.doi.org/10.1016/j.sjbs.2016.01.026 |
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author | Nour-Neamatollahi, Ali Siadat, Seyed Davar Yari, Shamsi Tasbiti, Alireza Hadizadeh Ebrahimzadeh, Nayereh Vaziri, Farzam Fateh, Abolfazl Ghazanfari, Morteza Abdolrahimi, Farid Pourazar, Shahin Bahrmand, Ahmadreza |
author_facet | Nour-Neamatollahi, Ali Siadat, Seyed Davar Yari, Shamsi Tasbiti, Alireza Hadizadeh Ebrahimzadeh, Nayereh Vaziri, Farzam Fateh, Abolfazl Ghazanfari, Morteza Abdolrahimi, Farid Pourazar, Shahin Bahrmand, Ahmadreza |
author_sort | Nour-Neamatollahi, Ali |
collection | PubMed |
description | Mycobacterium tuberculosis, acid fast bacilli from the family of Mycobacteriaceae, is the causative agent of most cases of tuberculosis. Tuberculosis, as a communicable disease, remains a serious public health threat, killing more than one million people globally every year. Primary diagnosis of tuberculosis bacilli (TB) relies mainly on microscopic detection of acid fast bacilli (AFB), but the method suffers from low sensitivity and the results largely depend on the technician’s skill. New diagnostic tools are necessary to be introduced for rapid and accurate detection of the bacilli in sputum samples. We, in collaboration with Anda Biologicals, have developed a new platform, named as “Patho-tb”, for rapid detection of AFB with high sensitivity and with low dependence on human skills. Evaluation of Patho-tb test performance was done in two settings: (1) primary field study conducted using 38 sputa from high TB prevalence area of Iran (Zabol city near to the Afghanistan border), and (2) main study conducted using 476 sputa from Tehran, capital of Iran. Patho-tb was applied for processed sputum samples in parallel with routine diagnostic methods (including AFB microscopy, culture and PCR). All test results were compared to final clinical diagnostic state of an individual and diagnostic sensitivity (DSe), specificity, positive predictive value, negative predictive value and accuracy of each test results were calculated using standard formulations. Analytical sensitivity and specificity of the Patho-tb test were also determined. Calculated values for five above mentioned parameters are as follows: for field study: AFB (DSe: 29.6, DSp: 81.8, PPV: 80, NPV: 23.1, AC: 44.7), Patho-tb (DSe: 63, DSp: 72.7, PPV: 85, NPV: 44.4, AC: 65.8), and for main study: AFB (DSe: 86.1, DSp: 99.4, PPV: 98.5, NPV: 93.9, AC: 95.2), Patho-tb (DSe: 97.4, DSp: 92.9, PPV: 86.5, NPV: 98.7, AC: 94.3). Reproducibility of Patho-tb test results were near to 100% (Cohen’s kappa value between 0.85 and 1). The detection limit of Patho-tb test with 100% positivity rate was 3 × 10(3) cells/ml of sputum. In the field study, Patho-tb test was 33.4% more sensitive than AFB microscopy, while the improvement was only 11.3% during the main study. Patho-tb results are easy to interpret and the test can be merged with other screening tests, like AFB. Totally, Patho-tb test alone or in conjunction with AFB microscopy is a useful screening tool for TB detection especially in poor geographical lab conditions. |
format | Online Article Text |
id | pubmed-5910638 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-59106382018-04-23 A new diagnostic tool for rapid and accurate detection of Mycobacterium tuberculosis Nour-Neamatollahi, Ali Siadat, Seyed Davar Yari, Shamsi Tasbiti, Alireza Hadizadeh Ebrahimzadeh, Nayereh Vaziri, Farzam Fateh, Abolfazl Ghazanfari, Morteza Abdolrahimi, Farid Pourazar, Shahin Bahrmand, Ahmadreza Saudi J Biol Sci Article Mycobacterium tuberculosis, acid fast bacilli from the family of Mycobacteriaceae, is the causative agent of most cases of tuberculosis. Tuberculosis, as a communicable disease, remains a serious public health threat, killing more than one million people globally every year. Primary diagnosis of tuberculosis bacilli (TB) relies mainly on microscopic detection of acid fast bacilli (AFB), but the method suffers from low sensitivity and the results largely depend on the technician’s skill. New diagnostic tools are necessary to be introduced for rapid and accurate detection of the bacilli in sputum samples. We, in collaboration with Anda Biologicals, have developed a new platform, named as “Patho-tb”, for rapid detection of AFB with high sensitivity and with low dependence on human skills. Evaluation of Patho-tb test performance was done in two settings: (1) primary field study conducted using 38 sputa from high TB prevalence area of Iran (Zabol city near to the Afghanistan border), and (2) main study conducted using 476 sputa from Tehran, capital of Iran. Patho-tb was applied for processed sputum samples in parallel with routine diagnostic methods (including AFB microscopy, culture and PCR). All test results were compared to final clinical diagnostic state of an individual and diagnostic sensitivity (DSe), specificity, positive predictive value, negative predictive value and accuracy of each test results were calculated using standard formulations. Analytical sensitivity and specificity of the Patho-tb test were also determined. Calculated values for five above mentioned parameters are as follows: for field study: AFB (DSe: 29.6, DSp: 81.8, PPV: 80, NPV: 23.1, AC: 44.7), Patho-tb (DSe: 63, DSp: 72.7, PPV: 85, NPV: 44.4, AC: 65.8), and for main study: AFB (DSe: 86.1, DSp: 99.4, PPV: 98.5, NPV: 93.9, AC: 95.2), Patho-tb (DSe: 97.4, DSp: 92.9, PPV: 86.5, NPV: 98.7, AC: 94.3). Reproducibility of Patho-tb test results were near to 100% (Cohen’s kappa value between 0.85 and 1). The detection limit of Patho-tb test with 100% positivity rate was 3 × 10(3) cells/ml of sputum. In the field study, Patho-tb test was 33.4% more sensitive than AFB microscopy, while the improvement was only 11.3% during the main study. Patho-tb results are easy to interpret and the test can be merged with other screening tests, like AFB. Totally, Patho-tb test alone or in conjunction with AFB microscopy is a useful screening tool for TB detection especially in poor geographical lab conditions. Elsevier 2018-03 2016-03-09 /pmc/articles/PMC5910638/ /pubmed/29686505 http://dx.doi.org/10.1016/j.sjbs.2016.01.026 Text en © 2016 Production and hosting by Elsevier B.V. on behalf of King Saud University. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Article Nour-Neamatollahi, Ali Siadat, Seyed Davar Yari, Shamsi Tasbiti, Alireza Hadizadeh Ebrahimzadeh, Nayereh Vaziri, Farzam Fateh, Abolfazl Ghazanfari, Morteza Abdolrahimi, Farid Pourazar, Shahin Bahrmand, Ahmadreza A new diagnostic tool for rapid and accurate detection of Mycobacterium tuberculosis |
title | A new diagnostic tool for rapid and accurate detection of Mycobacterium tuberculosis |
title_full | A new diagnostic tool for rapid and accurate detection of Mycobacterium tuberculosis |
title_fullStr | A new diagnostic tool for rapid and accurate detection of Mycobacterium tuberculosis |
title_full_unstemmed | A new diagnostic tool for rapid and accurate detection of Mycobacterium tuberculosis |
title_short | A new diagnostic tool for rapid and accurate detection of Mycobacterium tuberculosis |
title_sort | new diagnostic tool for rapid and accurate detection of mycobacterium tuberculosis |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5910638/ https://www.ncbi.nlm.nih.gov/pubmed/29686505 http://dx.doi.org/10.1016/j.sjbs.2016.01.026 |
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