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Differentially expressed and survival‐related proteins of lung adenocarcinoma with bone metastasis
Despite recent advances in targeted and immune‐based therapies, the poor prognosis of lung adenocarcinoma (LUAD) with bone metastasis (BM) remains a challenge. First, two‐dimensional gel electrophoresis (2‐DE) was used to identify proteins that were differentially expressed in LUAD with BM, and then...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5911611/ https://www.ncbi.nlm.nih.gov/pubmed/29522283 http://dx.doi.org/10.1002/cam4.1363 |
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author | Yang, Mengdi Sun, Yi Sun, Jing Wang, Zhiyu Zhou, Yiyi Yao, Guangyu Gu, Yifeng Zhang, Huizhen Zhao, Hui |
author_facet | Yang, Mengdi Sun, Yi Sun, Jing Wang, Zhiyu Zhou, Yiyi Yao, Guangyu Gu, Yifeng Zhang, Huizhen Zhao, Hui |
author_sort | Yang, Mengdi |
collection | PubMed |
description | Despite recent advances in targeted and immune‐based therapies, the poor prognosis of lung adenocarcinoma (LUAD) with bone metastasis (BM) remains a challenge. First, two‐dimensional gel electrophoresis (2‐DE) was used to identify proteins that were differentially expressed in LUAD with BM, and then matrix‐assisted laser desorption/ionization time of flight mass spectrometry (MALDI‐TOF‐MS) was used to identify these proteins. Second, the Cancer Genome Atlas (TCGA) was used to identify mutations in these differentially expressed proteins and Kaplan–Meier plotter (KM Plotter) was used to generate survival curves for the analyzed cases. Immunohistochemistry (IHC) was used to check the expression of proteins in 28 patients with BM and nine patients with LUAD. Lastly, the results were analyzed with respect to clinical features and patient's follow‐up. We identified a number of matched proteins from 2‐DE. High expression of enolase 1 (ENO1) (HR = 1.67, logrank P = 1.9E‐05), ribosomal protein lateral stalk subunit P2 (RPLP2) (HR = 1.77, logrank P = 2.9e‐06), and NME/NM23 nucleoside diphosphate kinase 2 (NME1‐NME2) (HR = 2.65, logrank P = 3.9E‐15) was all significantly associated with poor survival (P < 0.05). Further, ENO1 was upregulated (P = 0.0004) and calcyphosine (CAPS1) was downregulated (P = 5.34E‐07) in TCGA LUAD RNA‐seq expression data. IHC revealed that prominent ENO1 staining (OR = 7.5, P = 0.034) and low levels of CAPS1 (OR = 0.01, P < 0.0001) staining were associated with BM incidence. Finally, we found that LUAD patients with high expression of ENO1 and RPLP2 had worse overall survival. This is the first instance where the genes ENO1, RPLP2, NME1‐NME2 and CAPS1 were associated with disease severity and progression in LUAD patients with BM. Thus, with this study, we have identified potential biomarkers and therapeutic targets for this disease. |
format | Online Article Text |
id | pubmed-5911611 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-59116112018-04-30 Differentially expressed and survival‐related proteins of lung adenocarcinoma with bone metastasis Yang, Mengdi Sun, Yi Sun, Jing Wang, Zhiyu Zhou, Yiyi Yao, Guangyu Gu, Yifeng Zhang, Huizhen Zhao, Hui Cancer Med Clinical Cancer Research Despite recent advances in targeted and immune‐based therapies, the poor prognosis of lung adenocarcinoma (LUAD) with bone metastasis (BM) remains a challenge. First, two‐dimensional gel electrophoresis (2‐DE) was used to identify proteins that were differentially expressed in LUAD with BM, and then matrix‐assisted laser desorption/ionization time of flight mass spectrometry (MALDI‐TOF‐MS) was used to identify these proteins. Second, the Cancer Genome Atlas (TCGA) was used to identify mutations in these differentially expressed proteins and Kaplan–Meier plotter (KM Plotter) was used to generate survival curves for the analyzed cases. Immunohistochemistry (IHC) was used to check the expression of proteins in 28 patients with BM and nine patients with LUAD. Lastly, the results were analyzed with respect to clinical features and patient's follow‐up. We identified a number of matched proteins from 2‐DE. High expression of enolase 1 (ENO1) (HR = 1.67, logrank P = 1.9E‐05), ribosomal protein lateral stalk subunit P2 (RPLP2) (HR = 1.77, logrank P = 2.9e‐06), and NME/NM23 nucleoside diphosphate kinase 2 (NME1‐NME2) (HR = 2.65, logrank P = 3.9E‐15) was all significantly associated with poor survival (P < 0.05). Further, ENO1 was upregulated (P = 0.0004) and calcyphosine (CAPS1) was downregulated (P = 5.34E‐07) in TCGA LUAD RNA‐seq expression data. IHC revealed that prominent ENO1 staining (OR = 7.5, P = 0.034) and low levels of CAPS1 (OR = 0.01, P < 0.0001) staining were associated with BM incidence. Finally, we found that LUAD patients with high expression of ENO1 and RPLP2 had worse overall survival. This is the first instance where the genes ENO1, RPLP2, NME1‐NME2 and CAPS1 were associated with disease severity and progression in LUAD patients with BM. Thus, with this study, we have identified potential biomarkers and therapeutic targets for this disease. John Wiley and Sons Inc. 2018-03-09 /pmc/articles/PMC5911611/ /pubmed/29522283 http://dx.doi.org/10.1002/cam4.1363 Text en © 2018 The Authors. Cancer Medicine published by John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Clinical Cancer Research Yang, Mengdi Sun, Yi Sun, Jing Wang, Zhiyu Zhou, Yiyi Yao, Guangyu Gu, Yifeng Zhang, Huizhen Zhao, Hui Differentially expressed and survival‐related proteins of lung adenocarcinoma with bone metastasis |
title | Differentially expressed and survival‐related proteins of lung adenocarcinoma with bone metastasis |
title_full | Differentially expressed and survival‐related proteins of lung adenocarcinoma with bone metastasis |
title_fullStr | Differentially expressed and survival‐related proteins of lung adenocarcinoma with bone metastasis |
title_full_unstemmed | Differentially expressed and survival‐related proteins of lung adenocarcinoma with bone metastasis |
title_short | Differentially expressed and survival‐related proteins of lung adenocarcinoma with bone metastasis |
title_sort | differentially expressed and survival‐related proteins of lung adenocarcinoma with bone metastasis |
topic | Clinical Cancer Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5911611/ https://www.ncbi.nlm.nih.gov/pubmed/29522283 http://dx.doi.org/10.1002/cam4.1363 |
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