Cargando…

Planktonic microbial profiling in water samples from a Brazilian Amazonian reservoir

Our comprehension of the dynamics and diversity of freshwater planktonic bacterial communities is far from complete concerning the Brazilian Amazonian region. Therefore, reference studies are urgently needed. We mapped bacterial communities present in the planktonic communities of a freshwater artif...

Descripción completa

Detalles Bibliográficos
Autores principales: Cabral, Bianca C. A., Hoffmann, Luísa, Budowle, Bruce, Ürményi, Turán P., Moura‐Neto, Rodrigo S., Azevedo, Sandra M. F. O., Silva, Rosane
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5911997/
https://www.ncbi.nlm.nih.gov/pubmed/29380948
http://dx.doi.org/10.1002/mbo3.523
_version_ 1783316314223280128
author Cabral, Bianca C. A.
Hoffmann, Luísa
Budowle, Bruce
Ürményi, Turán P.
Moura‐Neto, Rodrigo S.
Azevedo, Sandra M. F. O.
Silva, Rosane
author_facet Cabral, Bianca C. A.
Hoffmann, Luísa
Budowle, Bruce
Ürményi, Turán P.
Moura‐Neto, Rodrigo S.
Azevedo, Sandra M. F. O.
Silva, Rosane
author_sort Cabral, Bianca C. A.
collection PubMed
description Our comprehension of the dynamics and diversity of freshwater planktonic bacterial communities is far from complete concerning the Brazilian Amazonian region. Therefore, reference studies are urgently needed. We mapped bacterial communities present in the planktonic communities of a freshwater artificial reservoir located in the western Amazonian basin. Two samples were obtained from rainy and dry seasons, the periods during which water quality and plankton diversity undergo the most significant changes. Hypervariable 16S rRNA and shotgun sequencing were performed to describe the first reference of a microbial community in an Amazonian lentic system. Microbial composition consisted mainly of Betaproteobacteria, Cyanobacteria, Alphaproteobacteria, and Actinobacteria in the dry period. The bacteria distribution in the rainy period was notably absent of Cyanobacteria. Microcystis was observed in the dry period in which the gene cluster for cyanotoxins was found. Iron acquisition gene group was higher in the sample from the rainy season. This work mapped the first inventory of the planktonic microbial community of a large water reservoir in the Amazon, providing a reference for future functional studies and determining other communities and how they interact.
format Online
Article
Text
id pubmed-5911997
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher John Wiley and Sons Inc.
record_format MEDLINE/PubMed
spelling pubmed-59119972018-05-02 Planktonic microbial profiling in water samples from a Brazilian Amazonian reservoir Cabral, Bianca C. A. Hoffmann, Luísa Budowle, Bruce Ürményi, Turán P. Moura‐Neto, Rodrigo S. Azevedo, Sandra M. F. O. Silva, Rosane Microbiologyopen Original Research Our comprehension of the dynamics and diversity of freshwater planktonic bacterial communities is far from complete concerning the Brazilian Amazonian region. Therefore, reference studies are urgently needed. We mapped bacterial communities present in the planktonic communities of a freshwater artificial reservoir located in the western Amazonian basin. Two samples were obtained from rainy and dry seasons, the periods during which water quality and plankton diversity undergo the most significant changes. Hypervariable 16S rRNA and shotgun sequencing were performed to describe the first reference of a microbial community in an Amazonian lentic system. Microbial composition consisted mainly of Betaproteobacteria, Cyanobacteria, Alphaproteobacteria, and Actinobacteria in the dry period. The bacteria distribution in the rainy period was notably absent of Cyanobacteria. Microcystis was observed in the dry period in which the gene cluster for cyanotoxins was found. Iron acquisition gene group was higher in the sample from the rainy season. This work mapped the first inventory of the planktonic microbial community of a large water reservoir in the Amazon, providing a reference for future functional studies and determining other communities and how they interact. John Wiley and Sons Inc. 2018-01-30 /pmc/articles/PMC5911997/ /pubmed/29380948 http://dx.doi.org/10.1002/mbo3.523 Text en © 2018 The Authors. MicrobiologyOpen published by John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Research
Cabral, Bianca C. A.
Hoffmann, Luísa
Budowle, Bruce
Ürményi, Turán P.
Moura‐Neto, Rodrigo S.
Azevedo, Sandra M. F. O.
Silva, Rosane
Planktonic microbial profiling in water samples from a Brazilian Amazonian reservoir
title Planktonic microbial profiling in water samples from a Brazilian Amazonian reservoir
title_full Planktonic microbial profiling in water samples from a Brazilian Amazonian reservoir
title_fullStr Planktonic microbial profiling in water samples from a Brazilian Amazonian reservoir
title_full_unstemmed Planktonic microbial profiling in water samples from a Brazilian Amazonian reservoir
title_short Planktonic microbial profiling in water samples from a Brazilian Amazonian reservoir
title_sort planktonic microbial profiling in water samples from a brazilian amazonian reservoir
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5911997/
https://www.ncbi.nlm.nih.gov/pubmed/29380948
http://dx.doi.org/10.1002/mbo3.523
work_keys_str_mv AT cabralbiancaca planktonicmicrobialprofilinginwatersamplesfromabrazilianamazonianreservoir
AT hoffmannluisa planktonicmicrobialprofilinginwatersamplesfromabrazilianamazonianreservoir
AT budowlebruce planktonicmicrobialprofilinginwatersamplesfromabrazilianamazonianreservoir
AT urmenyituranp planktonicmicrobialprofilinginwatersamplesfromabrazilianamazonianreservoir
AT mouranetorodrigos planktonicmicrobialprofilinginwatersamplesfromabrazilianamazonianreservoir
AT azevedosandramfo planktonicmicrobialprofilinginwatersamplesfromabrazilianamazonianreservoir
AT silvarosane planktonicmicrobialprofilinginwatersamplesfromabrazilianamazonianreservoir