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Assessing Similarity Among Individual Tumor Size Lesion Dynamics: The CICIL Methodology

Mathematical models of tumor dynamics generally omit information on individual target lesions (iTLs), and consider the most important variable to be the sum of tumor sizes (TS). However, differences in lesion dynamics might be predictive of tumor progression. To exploit this information, we have dev...

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Autores principales: Terranova, Nadia, Girard, Pascal, Ioannou, Konstantinos, Klinkhardt, Ute, Munafo, Alain
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5915614/
https://www.ncbi.nlm.nih.gov/pubmed/29388396
http://dx.doi.org/10.1002/psp4.12284
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author Terranova, Nadia
Girard, Pascal
Ioannou, Konstantinos
Klinkhardt, Ute
Munafo, Alain
author_facet Terranova, Nadia
Girard, Pascal
Ioannou, Konstantinos
Klinkhardt, Ute
Munafo, Alain
author_sort Terranova, Nadia
collection PubMed
description Mathematical models of tumor dynamics generally omit information on individual target lesions (iTLs), and consider the most important variable to be the sum of tumor sizes (TS). However, differences in lesion dynamics might be predictive of tumor progression. To exploit this information, we have developed a novel and flexible approach for the non‐parametric analysis of iTLs, which integrates knowledge from signal processing and machine learning. We called this new methodology ClassIfication Clustering of Individual Lesions (CICIL). We used CICIL to assess similarities among the TS dynamics of 3,223 iTLs measured in 1,056 patients with metastatic colorectal cancer treated with cetuximab combined with irinotecan, in two phase II studies. We mainly observed similar dynamics among lesions within the same tumor site classification. In contrast, lesions in anatomic locations with different features showed different dynamics in about 35% of patients. The CICIL methodology has also been implemented in a user‐friendly and efficient Java‐based framework.
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spelling pubmed-59156142018-04-25 Assessing Similarity Among Individual Tumor Size Lesion Dynamics: The CICIL Methodology Terranova, Nadia Girard, Pascal Ioannou, Konstantinos Klinkhardt, Ute Munafo, Alain CPT Pharmacometrics Syst Pharmacol Article Mathematical models of tumor dynamics generally omit information on individual target lesions (iTLs), and consider the most important variable to be the sum of tumor sizes (TS). However, differences in lesion dynamics might be predictive of tumor progression. To exploit this information, we have developed a novel and flexible approach for the non‐parametric analysis of iTLs, which integrates knowledge from signal processing and machine learning. We called this new methodology ClassIfication Clustering of Individual Lesions (CICIL). We used CICIL to assess similarities among the TS dynamics of 3,223 iTLs measured in 1,056 patients with metastatic colorectal cancer treated with cetuximab combined with irinotecan, in two phase II studies. We mainly observed similar dynamics among lesions within the same tumor site classification. In contrast, lesions in anatomic locations with different features showed different dynamics in about 35% of patients. The CICIL methodology has also been implemented in a user‐friendly and efficient Java‐based framework. John Wiley and Sons Inc. 2018-02-21 2018-04 /pmc/articles/PMC5915614/ /pubmed/29388396 http://dx.doi.org/10.1002/psp4.12284 Text en © 2018 The Authors CPT: Pharmacometrics & Systems Pharmacology published by Wiley Periodicals, Inc. on behalf of American Society for Clinical Pharmacology and Therapeutics This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
spellingShingle Article
Terranova, Nadia
Girard, Pascal
Ioannou, Konstantinos
Klinkhardt, Ute
Munafo, Alain
Assessing Similarity Among Individual Tumor Size Lesion Dynamics: The CICIL Methodology
title Assessing Similarity Among Individual Tumor Size Lesion Dynamics: The CICIL Methodology
title_full Assessing Similarity Among Individual Tumor Size Lesion Dynamics: The CICIL Methodology
title_fullStr Assessing Similarity Among Individual Tumor Size Lesion Dynamics: The CICIL Methodology
title_full_unstemmed Assessing Similarity Among Individual Tumor Size Lesion Dynamics: The CICIL Methodology
title_short Assessing Similarity Among Individual Tumor Size Lesion Dynamics: The CICIL Methodology
title_sort assessing similarity among individual tumor size lesion dynamics: the cicil methodology
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5915614/
https://www.ncbi.nlm.nih.gov/pubmed/29388396
http://dx.doi.org/10.1002/psp4.12284
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