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A forecasting model for dengue incidence in the District of Gampaha, Sri Lanka

BACKGROUND: Dengue is one of the major health problems in Sri Lanka causing an enormous social and economic burden to the country. An accurate early warning system can enhance the efficiency of preventive measures. The aim of the study was to develop and validate a simple accurate forecasting model...

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Autores principales: Withanage, Gayan P., Viswakula, Sameera D., Nilmini Silva Gunawardena, Y. I., Hapugoda, Menaka D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5916713/
https://www.ncbi.nlm.nih.gov/pubmed/29690906
http://dx.doi.org/10.1186/s13071-018-2828-2
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author Withanage, Gayan P.
Viswakula, Sameera D.
Nilmini Silva Gunawardena, Y. I.
Hapugoda, Menaka D.
author_facet Withanage, Gayan P.
Viswakula, Sameera D.
Nilmini Silva Gunawardena, Y. I.
Hapugoda, Menaka D.
author_sort Withanage, Gayan P.
collection PubMed
description BACKGROUND: Dengue is one of the major health problems in Sri Lanka causing an enormous social and economic burden to the country. An accurate early warning system can enhance the efficiency of preventive measures. The aim of the study was to develop and validate a simple accurate forecasting model for the District of Gampaha, Sri Lanka. Three time-series regression models were developed using monthly rainfall, rainy days, temperature, humidity, wind speed and retrospective dengue incidences over the period January 2012 to November 2015 for the District of Gampaha, Sri Lanka. Various lag times were analyzed to identify optimum forecasting periods including interactions of multiple lags. The models were validated using epidemiological data from December 2015 to November 2017. Prepared models were compared based on Akaike’s information criterion, Bayesian information criterion and residual analysis. RESULTS: The selected model forecasted correctly with mean absolute errors of 0.07 and 0.22, and root mean squared errors of 0.09 and 0.28, for training and validation periods, respectively. There were no dengue epidemics observed in the district during the training period and nine outbreaks occurred during the forecasting period. The proposed model captured five outbreaks and correctly rejected 14 within the testing period of 24 months. The Pierce skill score of the model was 0.49, with a receiver operating characteristic of 86% and 92% sensitivity. CONCLUSIONS: The developed weather based forecasting model allows warnings of impending dengue outbreaks and epidemics in advance of one month with high accuracy. Depending upon climatic factors, the previous month’s dengue cases had a significant effect on the dengue incidences of the current month. The simple, precise and understandable forecasting model developed could be used to manage limited public health resources effectively for patient management, vector surveillance and intervention programmes in the district. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s13071-018-2828-2) contains supplementary material, which is available to authorized users.
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spelling pubmed-59167132018-04-30 A forecasting model for dengue incidence in the District of Gampaha, Sri Lanka Withanage, Gayan P. Viswakula, Sameera D. Nilmini Silva Gunawardena, Y. I. Hapugoda, Menaka D. Parasit Vectors Research BACKGROUND: Dengue is one of the major health problems in Sri Lanka causing an enormous social and economic burden to the country. An accurate early warning system can enhance the efficiency of preventive measures. The aim of the study was to develop and validate a simple accurate forecasting model for the District of Gampaha, Sri Lanka. Three time-series regression models were developed using monthly rainfall, rainy days, temperature, humidity, wind speed and retrospective dengue incidences over the period January 2012 to November 2015 for the District of Gampaha, Sri Lanka. Various lag times were analyzed to identify optimum forecasting periods including interactions of multiple lags. The models were validated using epidemiological data from December 2015 to November 2017. Prepared models were compared based on Akaike’s information criterion, Bayesian information criterion and residual analysis. RESULTS: The selected model forecasted correctly with mean absolute errors of 0.07 and 0.22, and root mean squared errors of 0.09 and 0.28, for training and validation periods, respectively. There were no dengue epidemics observed in the district during the training period and nine outbreaks occurred during the forecasting period. The proposed model captured five outbreaks and correctly rejected 14 within the testing period of 24 months. The Pierce skill score of the model was 0.49, with a receiver operating characteristic of 86% and 92% sensitivity. CONCLUSIONS: The developed weather based forecasting model allows warnings of impending dengue outbreaks and epidemics in advance of one month with high accuracy. Depending upon climatic factors, the previous month’s dengue cases had a significant effect on the dengue incidences of the current month. The simple, precise and understandable forecasting model developed could be used to manage limited public health resources effectively for patient management, vector surveillance and intervention programmes in the district. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s13071-018-2828-2) contains supplementary material, which is available to authorized users. BioMed Central 2018-04-24 /pmc/articles/PMC5916713/ /pubmed/29690906 http://dx.doi.org/10.1186/s13071-018-2828-2 Text en © The Author(s). 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research
Withanage, Gayan P.
Viswakula, Sameera D.
Nilmini Silva Gunawardena, Y. I.
Hapugoda, Menaka D.
A forecasting model for dengue incidence in the District of Gampaha, Sri Lanka
title A forecasting model for dengue incidence in the District of Gampaha, Sri Lanka
title_full A forecasting model for dengue incidence in the District of Gampaha, Sri Lanka
title_fullStr A forecasting model for dengue incidence in the District of Gampaha, Sri Lanka
title_full_unstemmed A forecasting model for dengue incidence in the District of Gampaha, Sri Lanka
title_short A forecasting model for dengue incidence in the District of Gampaha, Sri Lanka
title_sort forecasting model for dengue incidence in the district of gampaha, sri lanka
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5916713/
https://www.ncbi.nlm.nih.gov/pubmed/29690906
http://dx.doi.org/10.1186/s13071-018-2828-2
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