Cargando…

Contrasting spatial, temporal and environmental patterns in observation and specimen based species occurrence data

Species occurrence data records the location and time of an encounter with a species, and is valuable for many aspects of ecological and evolutionary analyses. A key distinction within species occurrence data is between (1) collected and preserved specimens that can be taxonomically validated (i.e.,...

Descripción completa

Detalles Bibliográficos
Autores principales: Speed, James D. M., Bendiksby, Mika, Finstad, Anders G., Hassel, Kristian, Kolstad, Anders L., Prestø, Tommy
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5919666/
https://www.ncbi.nlm.nih.gov/pubmed/29698441
http://dx.doi.org/10.1371/journal.pone.0196417
_version_ 1783317679843573760
author Speed, James D. M.
Bendiksby, Mika
Finstad, Anders G.
Hassel, Kristian
Kolstad, Anders L.
Prestø, Tommy
author_facet Speed, James D. M.
Bendiksby, Mika
Finstad, Anders G.
Hassel, Kristian
Kolstad, Anders L.
Prestø, Tommy
author_sort Speed, James D. M.
collection PubMed
description Species occurrence data records the location and time of an encounter with a species, and is valuable for many aspects of ecological and evolutionary analyses. A key distinction within species occurrence data is between (1) collected and preserved specimens that can be taxonomically validated (i.e., natural history collections), and (2) observations, which are more error prone but richer in terms of number and spread of observations. In this study we analyse the distribution in temporal, spatial, taxonomic and environmental coverage of specimen- and observation based species occurrence data for land plants in Norway, a region with strong climatic and human population density gradients. Of 4.8 million species occurrence records, the majority (78%) were observations. However, there was a greater species richness in the specimen record (N = 4691) than in the observation record (N = 3193) and most species were recorded more as specimens than observations. Specimen data was on average older, and collected later during the year. Both record types were highly influenced by a small number of prolific contributors. The species most highly represented in the observation data set were widespread or invasive, while in the specimen records, taxonomically challenging species were overrepresented. Species occurrence records were unevenly spatially distributed. Both specimen and observation records were concentrated in regions of Norway with high human population density and with high temperatures and precipitation, but in different regions within Norway. Observation and specimen records thus differ in taxonomic, temporal, spatial and environmental coverage for a well-sampled group and study region, potentially influencing the ecological inferences made from studies utilizing species occurrence data. The distribution of observation data dominates the dataset, so inferences of species diversity and distributions do not correspond to the evolutionary or physiological knowledge of species, which is based on specimen data. We make recommendations for users of biodiversity data, and collectors to better exploit the complementary strengths of these distinct biodiversity data types.
format Online
Article
Text
id pubmed-5919666
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-59196662018-05-11 Contrasting spatial, temporal and environmental patterns in observation and specimen based species occurrence data Speed, James D. M. Bendiksby, Mika Finstad, Anders G. Hassel, Kristian Kolstad, Anders L. Prestø, Tommy PLoS One Research Article Species occurrence data records the location and time of an encounter with a species, and is valuable for many aspects of ecological and evolutionary analyses. A key distinction within species occurrence data is between (1) collected and preserved specimens that can be taxonomically validated (i.e., natural history collections), and (2) observations, which are more error prone but richer in terms of number and spread of observations. In this study we analyse the distribution in temporal, spatial, taxonomic and environmental coverage of specimen- and observation based species occurrence data for land plants in Norway, a region with strong climatic and human population density gradients. Of 4.8 million species occurrence records, the majority (78%) were observations. However, there was a greater species richness in the specimen record (N = 4691) than in the observation record (N = 3193) and most species were recorded more as specimens than observations. Specimen data was on average older, and collected later during the year. Both record types were highly influenced by a small number of prolific contributors. The species most highly represented in the observation data set were widespread or invasive, while in the specimen records, taxonomically challenging species were overrepresented. Species occurrence records were unevenly spatially distributed. Both specimen and observation records were concentrated in regions of Norway with high human population density and with high temperatures and precipitation, but in different regions within Norway. Observation and specimen records thus differ in taxonomic, temporal, spatial and environmental coverage for a well-sampled group and study region, potentially influencing the ecological inferences made from studies utilizing species occurrence data. The distribution of observation data dominates the dataset, so inferences of species diversity and distributions do not correspond to the evolutionary or physiological knowledge of species, which is based on specimen data. We make recommendations for users of biodiversity data, and collectors to better exploit the complementary strengths of these distinct biodiversity data types. Public Library of Science 2018-04-26 /pmc/articles/PMC5919666/ /pubmed/29698441 http://dx.doi.org/10.1371/journal.pone.0196417 Text en © 2018 Speed et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Speed, James D. M.
Bendiksby, Mika
Finstad, Anders G.
Hassel, Kristian
Kolstad, Anders L.
Prestø, Tommy
Contrasting spatial, temporal and environmental patterns in observation and specimen based species occurrence data
title Contrasting spatial, temporal and environmental patterns in observation and specimen based species occurrence data
title_full Contrasting spatial, temporal and environmental patterns in observation and specimen based species occurrence data
title_fullStr Contrasting spatial, temporal and environmental patterns in observation and specimen based species occurrence data
title_full_unstemmed Contrasting spatial, temporal and environmental patterns in observation and specimen based species occurrence data
title_short Contrasting spatial, temporal and environmental patterns in observation and specimen based species occurrence data
title_sort contrasting spatial, temporal and environmental patterns in observation and specimen based species occurrence data
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5919666/
https://www.ncbi.nlm.nih.gov/pubmed/29698441
http://dx.doi.org/10.1371/journal.pone.0196417
work_keys_str_mv AT speedjamesdm contrastingspatialtemporalandenvironmentalpatternsinobservationandspecimenbasedspeciesoccurrencedata
AT bendiksbymika contrastingspatialtemporalandenvironmentalpatternsinobservationandspecimenbasedspeciesoccurrencedata
AT finstadandersg contrastingspatialtemporalandenvironmentalpatternsinobservationandspecimenbasedspeciesoccurrencedata
AT hasselkristian contrastingspatialtemporalandenvironmentalpatternsinobservationandspecimenbasedspeciesoccurrencedata
AT kolstadandersl contrastingspatialtemporalandenvironmentalpatternsinobservationandspecimenbasedspeciesoccurrencedata
AT prestøtommy contrastingspatialtemporalandenvironmentalpatternsinobservationandspecimenbasedspeciesoccurrencedata