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Effect size and statistical power in the rodent fear conditioning literature – A systematic review

Proposals to increase research reproducibility frequently call for focusing on effect sizes instead of p values, as well as for increasing the statistical power of experiments. However, it is unclear to what extent these two concepts are indeed taken into account in basic biomedical science. To stud...

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Autores principales: Carneiro, Clarissa F. D., Moulin, Thiago C., Macleod, Malcolm R., Amaral, Olavo B.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5919667/
https://www.ncbi.nlm.nih.gov/pubmed/29698451
http://dx.doi.org/10.1371/journal.pone.0196258
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author Carneiro, Clarissa F. D.
Moulin, Thiago C.
Macleod, Malcolm R.
Amaral, Olavo B.
author_facet Carneiro, Clarissa F. D.
Moulin, Thiago C.
Macleod, Malcolm R.
Amaral, Olavo B.
author_sort Carneiro, Clarissa F. D.
collection PubMed
description Proposals to increase research reproducibility frequently call for focusing on effect sizes instead of p values, as well as for increasing the statistical power of experiments. However, it is unclear to what extent these two concepts are indeed taken into account in basic biomedical science. To study this in a real-case scenario, we performed a systematic review of effect sizes and statistical power in studies on learning of rodent fear conditioning, a widely used behavioral task to evaluate memory. Our search criteria yielded 410 experiments comparing control and treated groups in 122 articles. Interventions had a mean effect size of 29.5%, and amnesia caused by memory-impairing interventions was nearly always partial. Mean statistical power to detect the average effect size observed in well-powered experiments with significant differences (37.2%) was 65%, and was lower among studies with non-significant results. Only one article reported a sample size calculation, and our estimated sample size to achieve 80% power considering typical effect sizes and variances (15 animals per group) was reached in only 12.2% of experiments. Actual effect sizes correlated with effect size inferences made by readers on the basis of textual descriptions of results only when findings were non-significant, and neither effect size nor power correlated with study quality indicators, number of citations or impact factor of the publishing journal. In summary, effect sizes and statistical power have a wide distribution in the rodent fear conditioning literature, but do not seem to have a large influence on how results are described or cited. Failure to take these concepts into consideration might limit attempts to improve reproducibility in this field of science.
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spelling pubmed-59196672018-05-11 Effect size and statistical power in the rodent fear conditioning literature – A systematic review Carneiro, Clarissa F. D. Moulin, Thiago C. Macleod, Malcolm R. Amaral, Olavo B. PLoS One Research Article Proposals to increase research reproducibility frequently call for focusing on effect sizes instead of p values, as well as for increasing the statistical power of experiments. However, it is unclear to what extent these two concepts are indeed taken into account in basic biomedical science. To study this in a real-case scenario, we performed a systematic review of effect sizes and statistical power in studies on learning of rodent fear conditioning, a widely used behavioral task to evaluate memory. Our search criteria yielded 410 experiments comparing control and treated groups in 122 articles. Interventions had a mean effect size of 29.5%, and amnesia caused by memory-impairing interventions was nearly always partial. Mean statistical power to detect the average effect size observed in well-powered experiments with significant differences (37.2%) was 65%, and was lower among studies with non-significant results. Only one article reported a sample size calculation, and our estimated sample size to achieve 80% power considering typical effect sizes and variances (15 animals per group) was reached in only 12.2% of experiments. Actual effect sizes correlated with effect size inferences made by readers on the basis of textual descriptions of results only when findings were non-significant, and neither effect size nor power correlated with study quality indicators, number of citations or impact factor of the publishing journal. In summary, effect sizes and statistical power have a wide distribution in the rodent fear conditioning literature, but do not seem to have a large influence on how results are described or cited. Failure to take these concepts into consideration might limit attempts to improve reproducibility in this field of science. Public Library of Science 2018-04-26 /pmc/articles/PMC5919667/ /pubmed/29698451 http://dx.doi.org/10.1371/journal.pone.0196258 Text en © 2018 Carneiro et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Carneiro, Clarissa F. D.
Moulin, Thiago C.
Macleod, Malcolm R.
Amaral, Olavo B.
Effect size and statistical power in the rodent fear conditioning literature – A systematic review
title Effect size and statistical power in the rodent fear conditioning literature – A systematic review
title_full Effect size and statistical power in the rodent fear conditioning literature – A systematic review
title_fullStr Effect size and statistical power in the rodent fear conditioning literature – A systematic review
title_full_unstemmed Effect size and statistical power in the rodent fear conditioning literature – A systematic review
title_short Effect size and statistical power in the rodent fear conditioning literature – A systematic review
title_sort effect size and statistical power in the rodent fear conditioning literature – a systematic review
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5919667/
https://www.ncbi.nlm.nih.gov/pubmed/29698451
http://dx.doi.org/10.1371/journal.pone.0196258
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