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Identification of potential diagnostic and prognostic biomarkers in non-small cell lung cancer based on microarray data

Non-small cell lung cancer (NSCLC) is the most commonly diagnosed subtype of lung cancer, and the leading cause of cancer-associated mortalities worldwide. However, NSCLC is typically diagnosed at a late stage of disease due to a lack of effective diagnostic methods. In the present study, the GSE198...

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Autores principales: Huang, Ru, Gao, Lei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: D.A. Spandidos 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5921217/
https://www.ncbi.nlm.nih.gov/pubmed/29731852
http://dx.doi.org/10.3892/ol.2018.8153
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author Huang, Ru
Gao, Lei
author_facet Huang, Ru
Gao, Lei
author_sort Huang, Ru
collection PubMed
description Non-small cell lung cancer (NSCLC) is the most commonly diagnosed subtype of lung cancer, and the leading cause of cancer-associated mortalities worldwide. However, NSCLC is typically diagnosed at a late stage of disease due to a lack of effective diagnostic methods. In the present study, the GSE19804 dataset was obtained from the Gene Expression Omnibus, and a number of differentially expressed genes were identified between NSCLC and adjacent normal tissues. Based on functional and pathway enrichment analyses, five hub genes (cell-division cycle 20, centromere protein F, kinesin family member 2C, BUB1 mitotic checkpoint serine/threonine kinase and ZW10 interacting kinetochore protein) were selected. After verifying that the mRNA level of these hub genes was also upregulated in NSCLC tissues by using the GSE10072 dataset and in cell lines by reverse transcription-quantitative polymerase chain reaction. The diagnostic and prognostic potentials of these five gene candidates were evaluated using receiver operating characteristic curves and survival analyses. Taken together, the present study identified five candidates that are overexpressed in NSCLC tissues and could also serve as potential diagnostic and prognostic biomarkers for patients with NSCLC.
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spelling pubmed-59212172018-05-04 Identification of potential diagnostic and prognostic biomarkers in non-small cell lung cancer based on microarray data Huang, Ru Gao, Lei Oncol Lett Articles Non-small cell lung cancer (NSCLC) is the most commonly diagnosed subtype of lung cancer, and the leading cause of cancer-associated mortalities worldwide. However, NSCLC is typically diagnosed at a late stage of disease due to a lack of effective diagnostic methods. In the present study, the GSE19804 dataset was obtained from the Gene Expression Omnibus, and a number of differentially expressed genes were identified between NSCLC and adjacent normal tissues. Based on functional and pathway enrichment analyses, five hub genes (cell-division cycle 20, centromere protein F, kinesin family member 2C, BUB1 mitotic checkpoint serine/threonine kinase and ZW10 interacting kinetochore protein) were selected. After verifying that the mRNA level of these hub genes was also upregulated in NSCLC tissues by using the GSE10072 dataset and in cell lines by reverse transcription-quantitative polymerase chain reaction. The diagnostic and prognostic potentials of these five gene candidates were evaluated using receiver operating characteristic curves and survival analyses. Taken together, the present study identified five candidates that are overexpressed in NSCLC tissues and could also serve as potential diagnostic and prognostic biomarkers for patients with NSCLC. D.A. Spandidos 2018-05 2018-03-01 /pmc/articles/PMC5921217/ /pubmed/29731852 http://dx.doi.org/10.3892/ol.2018.8153 Text en Copyright: © Huang et al. This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made.
spellingShingle Articles
Huang, Ru
Gao, Lei
Identification of potential diagnostic and prognostic biomarkers in non-small cell lung cancer based on microarray data
title Identification of potential diagnostic and prognostic biomarkers in non-small cell lung cancer based on microarray data
title_full Identification of potential diagnostic and prognostic biomarkers in non-small cell lung cancer based on microarray data
title_fullStr Identification of potential diagnostic and prognostic biomarkers in non-small cell lung cancer based on microarray data
title_full_unstemmed Identification of potential diagnostic and prognostic biomarkers in non-small cell lung cancer based on microarray data
title_short Identification of potential diagnostic and prognostic biomarkers in non-small cell lung cancer based on microarray data
title_sort identification of potential diagnostic and prognostic biomarkers in non-small cell lung cancer based on microarray data
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5921217/
https://www.ncbi.nlm.nih.gov/pubmed/29731852
http://dx.doi.org/10.3892/ol.2018.8153
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