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Integrated multigene expression panel to prognosticate patients with gastric cancer
Most of the proposed individual markers had limited clinical utility due to the inherent biological and genetic heterogeneity of gastric cancer. We aimed to build a new molecular-based model to predict prognosis in patients with gastric cancer. A total of 200 patients who underwent gastric resection...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals LLC
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5922354/ https://www.ncbi.nlm.nih.gov/pubmed/29721160 http://dx.doi.org/10.18632/oncotarget.24661 |
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author | Kanda, Mitsuro Murotani, Kenta Tanaka, Haruyoshi Miwa, Takashi Umeda, Shinichi Tanaka, Chie Kobayashi, Daisuke Hayashi, Masamichi Hattori, Norifumi Suenaga, Masaya Yamada, Suguru Nakayama, Goro Fujiwara, Michitaka Kodera, Yasuhiro |
author_facet | Kanda, Mitsuro Murotani, Kenta Tanaka, Haruyoshi Miwa, Takashi Umeda, Shinichi Tanaka, Chie Kobayashi, Daisuke Hayashi, Masamichi Hattori, Norifumi Suenaga, Masaya Yamada, Suguru Nakayama, Goro Fujiwara, Michitaka Kodera, Yasuhiro |
author_sort | Kanda, Mitsuro |
collection | PubMed |
description | Most of the proposed individual markers had limited clinical utility due to the inherent biological and genetic heterogeneity of gastric cancer. We aimed to build a new molecular-based model to predict prognosis in patients with gastric cancer. A total of 200 patients who underwent gastric resection for gastric cancer were divided into learning and validation cohorts using a table of random numbers in a 1:1 ratio. In the learning cohort, mRNA expression levels of 15 molecular markers in gastric tissues were analyzed and concordance index (C-index) values of all single and combinations of the 15 candidate markers for overall survival were calculated. The multigene expression panel was designed according to C-index values and the subpopulation index. Expression scores were determined with weighting according to the coefficient of each constituent. The reproducibility of the panel was evaluated in the validation cohort. C-index values of the 15 single candidate markers ranged from 0.506–0.653. Among 32,767 combinations, the optimal and balanced expression panel comprised four constituents (MAGED2, SYT8, BTG1, and FAM46) and the C-index value was 0.793. Using this panel, patients were provisionally categorized with scores of 1–3, and clearly stratified into favorable, intermediate, and poor overall survival groups. In the validation cohort, both overall and disease-free survival rates decreased incrementally with increasing expression scores. Multivariate analysis revealed that the expression score was an independent prognostic factor for overall survival after curative gastrectomy. We developed an integrated multigene expression panel that simply and accurately stratified risk of patients with gastric cancer. |
format | Online Article Text |
id | pubmed-5922354 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Impact Journals LLC |
record_format | MEDLINE/PubMed |
spelling | pubmed-59223542018-05-02 Integrated multigene expression panel to prognosticate patients with gastric cancer Kanda, Mitsuro Murotani, Kenta Tanaka, Haruyoshi Miwa, Takashi Umeda, Shinichi Tanaka, Chie Kobayashi, Daisuke Hayashi, Masamichi Hattori, Norifumi Suenaga, Masaya Yamada, Suguru Nakayama, Goro Fujiwara, Michitaka Kodera, Yasuhiro Oncotarget Research Paper Most of the proposed individual markers had limited clinical utility due to the inherent biological and genetic heterogeneity of gastric cancer. We aimed to build a new molecular-based model to predict prognosis in patients with gastric cancer. A total of 200 patients who underwent gastric resection for gastric cancer were divided into learning and validation cohorts using a table of random numbers in a 1:1 ratio. In the learning cohort, mRNA expression levels of 15 molecular markers in gastric tissues were analyzed and concordance index (C-index) values of all single and combinations of the 15 candidate markers for overall survival were calculated. The multigene expression panel was designed according to C-index values and the subpopulation index. Expression scores were determined with weighting according to the coefficient of each constituent. The reproducibility of the panel was evaluated in the validation cohort. C-index values of the 15 single candidate markers ranged from 0.506–0.653. Among 32,767 combinations, the optimal and balanced expression panel comprised four constituents (MAGED2, SYT8, BTG1, and FAM46) and the C-index value was 0.793. Using this panel, patients were provisionally categorized with scores of 1–3, and clearly stratified into favorable, intermediate, and poor overall survival groups. In the validation cohort, both overall and disease-free survival rates decreased incrementally with increasing expression scores. Multivariate analysis revealed that the expression score was an independent prognostic factor for overall survival after curative gastrectomy. We developed an integrated multigene expression panel that simply and accurately stratified risk of patients with gastric cancer. Impact Journals LLC 2018-04-10 /pmc/articles/PMC5922354/ /pubmed/29721160 http://dx.doi.org/10.18632/oncotarget.24661 Text en Copyright: © 2018 Kanda et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/) 3.0 (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Kanda, Mitsuro Murotani, Kenta Tanaka, Haruyoshi Miwa, Takashi Umeda, Shinichi Tanaka, Chie Kobayashi, Daisuke Hayashi, Masamichi Hattori, Norifumi Suenaga, Masaya Yamada, Suguru Nakayama, Goro Fujiwara, Michitaka Kodera, Yasuhiro Integrated multigene expression panel to prognosticate patients with gastric cancer |
title | Integrated multigene expression panel to prognosticate patients with gastric cancer |
title_full | Integrated multigene expression panel to prognosticate patients with gastric cancer |
title_fullStr | Integrated multigene expression panel to prognosticate patients with gastric cancer |
title_full_unstemmed | Integrated multigene expression panel to prognosticate patients with gastric cancer |
title_short | Integrated multigene expression panel to prognosticate patients with gastric cancer |
title_sort | integrated multigene expression panel to prognosticate patients with gastric cancer |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5922354/ https://www.ncbi.nlm.nih.gov/pubmed/29721160 http://dx.doi.org/10.18632/oncotarget.24661 |
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