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Transcriptomic Analysis of Flower Bud Differentiation in Magnolia sinostellata

Magnolias are widely cultivated for their beautiful flowers, but despite their popularity, the molecular mechanisms regulating flower bud differentiation have not been elucidated. Here, we used paraffin sections and RNA-seq to study the process of flower bud differentiation in Magnolia sinostellata....

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Autores principales: Fan, Lijie, Chen, Mengqian, Dong, Bin, Wang, Ninghang, Yu, Qin, Wang, Xingli, Xuan, Lingjuan, Wang, Yaling, Zhang, Shouzhou, Shen, Yamei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5924554/
https://www.ncbi.nlm.nih.gov/pubmed/29659525
http://dx.doi.org/10.3390/genes9040212
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author Fan, Lijie
Chen, Mengqian
Dong, Bin
Wang, Ninghang
Yu, Qin
Wang, Xingli
Xuan, Lingjuan
Wang, Yaling
Zhang, Shouzhou
Shen, Yamei
author_facet Fan, Lijie
Chen, Mengqian
Dong, Bin
Wang, Ninghang
Yu, Qin
Wang, Xingli
Xuan, Lingjuan
Wang, Yaling
Zhang, Shouzhou
Shen, Yamei
author_sort Fan, Lijie
collection PubMed
description Magnolias are widely cultivated for their beautiful flowers, but despite their popularity, the molecular mechanisms regulating flower bud differentiation have not been elucidated. Here, we used paraffin sections and RNA-seq to study the process of flower bud differentiation in Magnolia sinostellata. Flower bud development occurred between 28 April and 30 May 2017 and was divided into five stages: undifferentiated, early flower bud differentiation, petal primordium differentiation, stamen primordium differentiation, and pistil primordium differentiation. A total of 52,441 expressed genes were identified, of which 11,592 were significantly differentially expressed in the five bud development stages. Of these, 82 genes were involved in the flowering. In addition, MADS-box and AP2 family genes play critical roles in the formation of flower organs and 20 differentially expressed genes associated with flower bud differentiation were identified in M. sinostellata. A qRT-PCR analysis verified that the MADS-box and AP2 family genes were expressed at high levels during flower bud differentiation. Consequently, this study provides a theoretical basis for the genetic regulation of flowering in M. sinostellata, which lays a foundation for further research into flowering genes and may facilitate the development of new cultivars.
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spelling pubmed-59245542018-05-03 Transcriptomic Analysis of Flower Bud Differentiation in Magnolia sinostellata Fan, Lijie Chen, Mengqian Dong, Bin Wang, Ninghang Yu, Qin Wang, Xingli Xuan, Lingjuan Wang, Yaling Zhang, Shouzhou Shen, Yamei Genes (Basel) Article Magnolias are widely cultivated for their beautiful flowers, but despite their popularity, the molecular mechanisms regulating flower bud differentiation have not been elucidated. Here, we used paraffin sections and RNA-seq to study the process of flower bud differentiation in Magnolia sinostellata. Flower bud development occurred between 28 April and 30 May 2017 and was divided into five stages: undifferentiated, early flower bud differentiation, petal primordium differentiation, stamen primordium differentiation, and pistil primordium differentiation. A total of 52,441 expressed genes were identified, of which 11,592 were significantly differentially expressed in the five bud development stages. Of these, 82 genes were involved in the flowering. In addition, MADS-box and AP2 family genes play critical roles in the formation of flower organs and 20 differentially expressed genes associated with flower bud differentiation were identified in M. sinostellata. A qRT-PCR analysis verified that the MADS-box and AP2 family genes were expressed at high levels during flower bud differentiation. Consequently, this study provides a theoretical basis for the genetic regulation of flowering in M. sinostellata, which lays a foundation for further research into flowering genes and may facilitate the development of new cultivars. MDPI 2018-04-16 /pmc/articles/PMC5924554/ /pubmed/29659525 http://dx.doi.org/10.3390/genes9040212 Text en © 2018 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Fan, Lijie
Chen, Mengqian
Dong, Bin
Wang, Ninghang
Yu, Qin
Wang, Xingli
Xuan, Lingjuan
Wang, Yaling
Zhang, Shouzhou
Shen, Yamei
Transcriptomic Analysis of Flower Bud Differentiation in Magnolia sinostellata
title Transcriptomic Analysis of Flower Bud Differentiation in Magnolia sinostellata
title_full Transcriptomic Analysis of Flower Bud Differentiation in Magnolia sinostellata
title_fullStr Transcriptomic Analysis of Flower Bud Differentiation in Magnolia sinostellata
title_full_unstemmed Transcriptomic Analysis of Flower Bud Differentiation in Magnolia sinostellata
title_short Transcriptomic Analysis of Flower Bud Differentiation in Magnolia sinostellata
title_sort transcriptomic analysis of flower bud differentiation in magnolia sinostellata
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5924554/
https://www.ncbi.nlm.nih.gov/pubmed/29659525
http://dx.doi.org/10.3390/genes9040212
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