Cargando…

Rapid and Visual Detection of Coxiella burnetii Using Recombinase Polymerase Amplification Combined with Lateral Flow Strips

Coxiella burnetii, a global-distributed biological warfare agent, is the causative agent of Q fever. Correct diagnosis of Q fever is challenging and developing a fast, simple, and reliable detection method is necessary. In this study, recombinase polymerase amplification (RPA) assay combined with la...

Descripción completa

Detalles Bibliográficos
Autores principales: Qi, Yong, Yin, Qiong, Shao, Yinxiu, Li, Suqin, Chen, Hongxia, Shen, Wanpeng, Rao, Jixian, Li, Jiameng, Li, Xiaoling, Sun, Yu, Lin, Yu, Deng, Yi, Zeng, Wenwen, Zheng, Shulong, Liu, Suyun, Li, Yuexi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5925019/
https://www.ncbi.nlm.nih.gov/pubmed/29850545
http://dx.doi.org/10.1155/2018/6417354
_version_ 1783318630741573632
author Qi, Yong
Yin, Qiong
Shao, Yinxiu
Li, Suqin
Chen, Hongxia
Shen, Wanpeng
Rao, Jixian
Li, Jiameng
Li, Xiaoling
Sun, Yu
Lin, Yu
Deng, Yi
Zeng, Wenwen
Zheng, Shulong
Liu, Suyun
Li, Yuexi
author_facet Qi, Yong
Yin, Qiong
Shao, Yinxiu
Li, Suqin
Chen, Hongxia
Shen, Wanpeng
Rao, Jixian
Li, Jiameng
Li, Xiaoling
Sun, Yu
Lin, Yu
Deng, Yi
Zeng, Wenwen
Zheng, Shulong
Liu, Suyun
Li, Yuexi
author_sort Qi, Yong
collection PubMed
description Coxiella burnetii, a global-distributed biological warfare agent, is the causative agent of Q fever. Correct diagnosis of Q fever is challenging and developing a fast, simple, and reliable detection method is necessary. In this study, recombinase polymerase amplification (RPA) assay combined with lateral flow (LF) test was developed targeting 23S rRNA gene of C. burnetii Xinqiao strain. Primers and probe were designed and synthesized, with one set with high amplification efficiency screened for establishment of the method. Reaction conditions were optimized. Sensitivity, specificity, and accuracy were evaluated. The established RPA-LF reaction could be completed in 30 minutes by combining RPA at 37°C with LF at room temperature, with visually judged results. The method showed good specificity without recognizing other bacteria evaluated. It detected positive plasmid and genomic DNA at levels of 10 copies/reaction and 7 copies/reaction, respectively, levels comparable to that of real-time quantitative PCR (RT-qPCR) targeting 23S rRNA gene established previously. Both RPA-LF and RT-qPCR were used to detect C. burnetii-infected mouse samples and the results were fully consistent. The method showed superior detection performance and will provide technical support against C. burnetii in resources-limited areas.
format Online
Article
Text
id pubmed-5925019
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Hindawi
record_format MEDLINE/PubMed
spelling pubmed-59250192018-05-30 Rapid and Visual Detection of Coxiella burnetii Using Recombinase Polymerase Amplification Combined with Lateral Flow Strips Qi, Yong Yin, Qiong Shao, Yinxiu Li, Suqin Chen, Hongxia Shen, Wanpeng Rao, Jixian Li, Jiameng Li, Xiaoling Sun, Yu Lin, Yu Deng, Yi Zeng, Wenwen Zheng, Shulong Liu, Suyun Li, Yuexi Biomed Res Int Research Article Coxiella burnetii, a global-distributed biological warfare agent, is the causative agent of Q fever. Correct diagnosis of Q fever is challenging and developing a fast, simple, and reliable detection method is necessary. In this study, recombinase polymerase amplification (RPA) assay combined with lateral flow (LF) test was developed targeting 23S rRNA gene of C. burnetii Xinqiao strain. Primers and probe were designed and synthesized, with one set with high amplification efficiency screened for establishment of the method. Reaction conditions were optimized. Sensitivity, specificity, and accuracy were evaluated. The established RPA-LF reaction could be completed in 30 minutes by combining RPA at 37°C with LF at room temperature, with visually judged results. The method showed good specificity without recognizing other bacteria evaluated. It detected positive plasmid and genomic DNA at levels of 10 copies/reaction and 7 copies/reaction, respectively, levels comparable to that of real-time quantitative PCR (RT-qPCR) targeting 23S rRNA gene established previously. Both RPA-LF and RT-qPCR were used to detect C. burnetii-infected mouse samples and the results were fully consistent. The method showed superior detection performance and will provide technical support against C. burnetii in resources-limited areas. Hindawi 2018-04-12 /pmc/articles/PMC5925019/ /pubmed/29850545 http://dx.doi.org/10.1155/2018/6417354 Text en Copyright © 2018 Yong Qi et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Qi, Yong
Yin, Qiong
Shao, Yinxiu
Li, Suqin
Chen, Hongxia
Shen, Wanpeng
Rao, Jixian
Li, Jiameng
Li, Xiaoling
Sun, Yu
Lin, Yu
Deng, Yi
Zeng, Wenwen
Zheng, Shulong
Liu, Suyun
Li, Yuexi
Rapid and Visual Detection of Coxiella burnetii Using Recombinase Polymerase Amplification Combined with Lateral Flow Strips
title Rapid and Visual Detection of Coxiella burnetii Using Recombinase Polymerase Amplification Combined with Lateral Flow Strips
title_full Rapid and Visual Detection of Coxiella burnetii Using Recombinase Polymerase Amplification Combined with Lateral Flow Strips
title_fullStr Rapid and Visual Detection of Coxiella burnetii Using Recombinase Polymerase Amplification Combined with Lateral Flow Strips
title_full_unstemmed Rapid and Visual Detection of Coxiella burnetii Using Recombinase Polymerase Amplification Combined with Lateral Flow Strips
title_short Rapid and Visual Detection of Coxiella burnetii Using Recombinase Polymerase Amplification Combined with Lateral Flow Strips
title_sort rapid and visual detection of coxiella burnetii using recombinase polymerase amplification combined with lateral flow strips
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5925019/
https://www.ncbi.nlm.nih.gov/pubmed/29850545
http://dx.doi.org/10.1155/2018/6417354
work_keys_str_mv AT qiyong rapidandvisualdetectionofcoxiellaburnetiiusingrecombinasepolymeraseamplificationcombinedwithlateralflowstrips
AT yinqiong rapidandvisualdetectionofcoxiellaburnetiiusingrecombinasepolymeraseamplificationcombinedwithlateralflowstrips
AT shaoyinxiu rapidandvisualdetectionofcoxiellaburnetiiusingrecombinasepolymeraseamplificationcombinedwithlateralflowstrips
AT lisuqin rapidandvisualdetectionofcoxiellaburnetiiusingrecombinasepolymeraseamplificationcombinedwithlateralflowstrips
AT chenhongxia rapidandvisualdetectionofcoxiellaburnetiiusingrecombinasepolymeraseamplificationcombinedwithlateralflowstrips
AT shenwanpeng rapidandvisualdetectionofcoxiellaburnetiiusingrecombinasepolymeraseamplificationcombinedwithlateralflowstrips
AT raojixian rapidandvisualdetectionofcoxiellaburnetiiusingrecombinasepolymeraseamplificationcombinedwithlateralflowstrips
AT lijiameng rapidandvisualdetectionofcoxiellaburnetiiusingrecombinasepolymeraseamplificationcombinedwithlateralflowstrips
AT lixiaoling rapidandvisualdetectionofcoxiellaburnetiiusingrecombinasepolymeraseamplificationcombinedwithlateralflowstrips
AT sunyu rapidandvisualdetectionofcoxiellaburnetiiusingrecombinasepolymeraseamplificationcombinedwithlateralflowstrips
AT linyu rapidandvisualdetectionofcoxiellaburnetiiusingrecombinasepolymeraseamplificationcombinedwithlateralflowstrips
AT dengyi rapidandvisualdetectionofcoxiellaburnetiiusingrecombinasepolymeraseamplificationcombinedwithlateralflowstrips
AT zengwenwen rapidandvisualdetectionofcoxiellaburnetiiusingrecombinasepolymeraseamplificationcombinedwithlateralflowstrips
AT zhengshulong rapidandvisualdetectionofcoxiellaburnetiiusingrecombinasepolymeraseamplificationcombinedwithlateralflowstrips
AT liusuyun rapidandvisualdetectionofcoxiellaburnetiiusingrecombinasepolymeraseamplificationcombinedwithlateralflowstrips
AT liyuexi rapidandvisualdetectionofcoxiellaburnetiiusingrecombinasepolymeraseamplificationcombinedwithlateralflowstrips