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Non-invasive tumor genotyping using radiogenomic biomarkers, a systematic review and oncology-wide pathway analysis

With targeted treatments playing an increasing role in oncology, the need arises for fast non-invasive genotyping in clinical practice. Radiogenomics is a rapidly evolving field of research aimed at identifying imaging biomarkers useful for non-invasive genotyping. Radiogenomic genotyping has the ad...

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Autores principales: Jansen, Robin W., van Amstel, Paul, Martens, Roland M., Kooi, Irsan E., Wesseling, Pieter, de Langen, Adrianus J., Menke-Van der Houven van Oordt, Catharina W., Jansen, Bernard H.E., Moll, Annette C., Dorsman, Josephine C., Castelijns, Jonas A., de Graaf, Pim, de Jong, Marcus C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals LLC 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5929452/
https://www.ncbi.nlm.nih.gov/pubmed/29732009
http://dx.doi.org/10.18632/oncotarget.24893
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author Jansen, Robin W.
van Amstel, Paul
Martens, Roland M.
Kooi, Irsan E.
Wesseling, Pieter
de Langen, Adrianus J.
Menke-Van der Houven van Oordt, Catharina W.
Jansen, Bernard H.E.
Moll, Annette C.
Dorsman, Josephine C.
Castelijns, Jonas A.
de Graaf, Pim
de Jong, Marcus C.
author_facet Jansen, Robin W.
van Amstel, Paul
Martens, Roland M.
Kooi, Irsan E.
Wesseling, Pieter
de Langen, Adrianus J.
Menke-Van der Houven van Oordt, Catharina W.
Jansen, Bernard H.E.
Moll, Annette C.
Dorsman, Josephine C.
Castelijns, Jonas A.
de Graaf, Pim
de Jong, Marcus C.
author_sort Jansen, Robin W.
collection PubMed
description With targeted treatments playing an increasing role in oncology, the need arises for fast non-invasive genotyping in clinical practice. Radiogenomics is a rapidly evolving field of research aimed at identifying imaging biomarkers useful for non-invasive genotyping. Radiogenomic genotyping has the advantage that it can capture tumor heterogeneity, can be performed repeatedly for treatment monitoring, and can be performed in malignancies for which biopsy is not available. In this systematic review of 187 included articles, we compiled a database of radiogenomic associations and unraveled networks of imaging groups and gene pathways oncology-wide. Results indicated that ill-defined tumor margins and tumor heterogeneity can potentially be used as imaging biomarkers for 1p/19q codeletion in glioma, relevant for prognosis and disease profiling. In non-small cell lung cancer, FDG-PET uptake and CT-ground-glass-opacity features were associated with treatment-informing traits including EGFR-mutations and ALK-rearrangements. Oncology-wide gene pathway analysis revealed an association between contrast enhancement (imaging) and the targetable VEGF-signalling pathway. Although the need of independent validation remains a concern, radiogenomic biomarkers showed potential for prognosis prediction and targeted treatment selection. Quantitative imaging enhanced the potential of multiparametric radiogenomic models. A wealth of data has been compiled for guiding future research towards robust non-invasive genomic profiling.
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spelling pubmed-59294522018-05-04 Non-invasive tumor genotyping using radiogenomic biomarkers, a systematic review and oncology-wide pathway analysis Jansen, Robin W. van Amstel, Paul Martens, Roland M. Kooi, Irsan E. Wesseling, Pieter de Langen, Adrianus J. Menke-Van der Houven van Oordt, Catharina W. Jansen, Bernard H.E. Moll, Annette C. Dorsman, Josephine C. Castelijns, Jonas A. de Graaf, Pim de Jong, Marcus C. Oncotarget Review With targeted treatments playing an increasing role in oncology, the need arises for fast non-invasive genotyping in clinical practice. Radiogenomics is a rapidly evolving field of research aimed at identifying imaging biomarkers useful for non-invasive genotyping. Radiogenomic genotyping has the advantage that it can capture tumor heterogeneity, can be performed repeatedly for treatment monitoring, and can be performed in malignancies for which biopsy is not available. In this systematic review of 187 included articles, we compiled a database of radiogenomic associations and unraveled networks of imaging groups and gene pathways oncology-wide. Results indicated that ill-defined tumor margins and tumor heterogeneity can potentially be used as imaging biomarkers for 1p/19q codeletion in glioma, relevant for prognosis and disease profiling. In non-small cell lung cancer, FDG-PET uptake and CT-ground-glass-opacity features were associated with treatment-informing traits including EGFR-mutations and ALK-rearrangements. Oncology-wide gene pathway analysis revealed an association between contrast enhancement (imaging) and the targetable VEGF-signalling pathway. Although the need of independent validation remains a concern, radiogenomic biomarkers showed potential for prognosis prediction and targeted treatment selection. Quantitative imaging enhanced the potential of multiparametric radiogenomic models. A wealth of data has been compiled for guiding future research towards robust non-invasive genomic profiling. Impact Journals LLC 2018-04-13 /pmc/articles/PMC5929452/ /pubmed/29732009 http://dx.doi.org/10.18632/oncotarget.24893 Text en Copyright: © 2018 Jansen et al. http://creativecommons.org/licenses/by/3.0/ This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/) (CC-BY), which permits unrestricted use and redistribution provided that the original author and source are credited.
spellingShingle Review
Jansen, Robin W.
van Amstel, Paul
Martens, Roland M.
Kooi, Irsan E.
Wesseling, Pieter
de Langen, Adrianus J.
Menke-Van der Houven van Oordt, Catharina W.
Jansen, Bernard H.E.
Moll, Annette C.
Dorsman, Josephine C.
Castelijns, Jonas A.
de Graaf, Pim
de Jong, Marcus C.
Non-invasive tumor genotyping using radiogenomic biomarkers, a systematic review and oncology-wide pathway analysis
title Non-invasive tumor genotyping using radiogenomic biomarkers, a systematic review and oncology-wide pathway analysis
title_full Non-invasive tumor genotyping using radiogenomic biomarkers, a systematic review and oncology-wide pathway analysis
title_fullStr Non-invasive tumor genotyping using radiogenomic biomarkers, a systematic review and oncology-wide pathway analysis
title_full_unstemmed Non-invasive tumor genotyping using radiogenomic biomarkers, a systematic review and oncology-wide pathway analysis
title_short Non-invasive tumor genotyping using radiogenomic biomarkers, a systematic review and oncology-wide pathway analysis
title_sort non-invasive tumor genotyping using radiogenomic biomarkers, a systematic review and oncology-wide pathway analysis
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5929452/
https://www.ncbi.nlm.nih.gov/pubmed/29732009
http://dx.doi.org/10.18632/oncotarget.24893
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